Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01588 ATGCCTGATGGTAGAGTTGGAGCACTTAAGTTATTGAAGGCTGGAAGTGGGCAGGGAGAAAGGAAGTTTAGGGCAGAGGTGGACATCATCAGCCGAATCCATCATCACCATTTGGTGTCATTAATTGGTTATTGCATATCTGAACAACAAAGAGTGCTTATCTATGAATCCGTTCCTAATGGGAATCTCAGTCAACACTTGCATGGTAACGAAGTGAATGACCAATTTTGGATTGGCAAAAGAGGATGA 249 0.4257 MPDGRVGALKLLKAGSGQGERKFRAEVDIISRIHHHHLVSLIGYCISEQQRVLIYESVPNGNLSQHLHGNEVNDQFWIGKRG 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01588 82 Gene3D Transferase(Phosphotransferase) domain 1 1 79 - -
Gma02g01588 82 PANTHER RECEPTOR-LIKE KINASE 1 73 - -
Gma02g01588 82 SUPERFAMILY Protein kinase-like (PK-like) 2 72 IPR011009 -
Gma02g01588 82 Pfam Protein tyrosine and serine/threonine kinase 8 70 IPR001245 GO:0004672|GO:0006468
Gma02g01588 82 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 73 - -
Gma02g01588 82 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01588 Gma-Chr2 32228132 32228476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01588 1 69 Trihelix Transcription Factor Family AT1G23540 68.116 2.76e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma02g01588 PK_Tyr_Ser-Thr 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01588 - - gsj:114369572 137.887