Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01575 ATGTGGCACGTGTGTTGTATGGTTTACTCAATGAGGGGCTGGGATTGGTTGCGGAGAGGCTCACGAAGATGGGTCTGGTGGAAGGAAGAGTTATGGTGGGGCACTATTATTTTGACAGCTGGGATAACCCTTGCATTATTTGGTGGTGTACGAAAGCATCCTATGGATCAGAATAATGTTCCTGTCAGGGGAGATATTCATGTCATAATTGTTGGTAATCCTGGTCTAGGTAAGAGCCAGTTGCTACAAGCAGCAGCTGCTGTCTCTCCACGTGGTATCTTTGTCTTTGGTAATGCCACAACCAAAGATGGCCTCACAGTAGCTGTAGTGAAGGATTCCATGACAAGTGACTATGCTTTTGAGGCCGGTGCTATGGTGCTGGCTGACAGTGGATTGTGTTGTATTGATGAGTTAGATAAAATGTCAATAGAGCATCAGGATTTGCTTAAGGCGATGGAGCAACAGCGTGTTTCTATTGCAAAGGCAGGATTAGTAGCAAGTTTATCATCCAGGACTTTTGTCTTAGCAGCTGCAAACCCCGCTTGTGGTCACTATAAagaaaacgaaggtcccataaggaagaaggtgatttggttgaggaaggtcattaaaccaattgtttgtgaccattgtcaaattccgttgcgtgttgatcaaactctctatggatccagttaa 678 0.3746 MWHVCCMVYSMRGWDWLRRGSRRWVWWKEELWWGTIILTAGITLALFGGVRKHPMDQNNVPVRGDIHVIIVGNPGLGKSQLLQAAAAVSPRGIFVFGNATTKDGLTVAVVKDSMTSDYAFEAGAMVLADSGLCCIDELDKMSIEHQDLLKAMEQQRVSIAKAGLVASLSSRTFVLAAANPACGHYKENEGPIRKKVIWLRKVIKPIVCDHCQIPLRVDQTLYGSS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01575 225 Pfam MCM P-loop domain 39 190 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 197 IPR027417 -
Gma02g01575 225 SMART AAA_5 64 204 IPR003593 -
Gma02g01575 225 Gene3D - 31 202 IPR027417 -
Gma02g01575 225 ProSiteProfiles MCM family domain profile. 33 191 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 SMART mcm 5 225 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 PANTHER DNA HELICASE MCM8 34 187 - -
Gma02g01575 225 PRINTS Mini-chromosome maintenance (MCM) protein family signature 63 78 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 PRINTS Mini-chromosome maintenance (MCM) protein family signature 123 137 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 PRINTS Mini-chromosome maintenance (MCM) protein family signature 150 163 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 PRINTS Mini-chromosome maintenance (MCM) protein family signature 174 186 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 34 187 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma02g01575 225 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01575 Gma-Chr2 31722100 31725613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01575 33 185 Core DNA Replication Machinery Family AT3G09660 81.046 5.08e-81 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01575 K10737 - gmx:102668842 465.692