Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01549 ATGGCTGAAATCGAAACTACCGTTCCAGATCCCACCCAAATCGACGTCAAACTCTTCAATCGCTGGAGCTTCGAGGATGTTAATGATATGTCTCTGGCTGATTACATTGGAGTGTCCCCATCAAAGCATGCTACATATGTTCCTCACACTGCTGGTAGGTACTCAGTGAAGAGGTTCAGGAAAGCGCAGTGCCCCATTGTTGAGAGGCTCACCAACTCTCTGATGATGCACGGGAGGAACAATGGAAAGAAGCTCATGGCTGTCAGGATTATCAAGCATGCCATGGAGATCATCCACTTGCTCACTGACCTGAACCCAATTCAGGTCATTGTTGATGCCGTCATCAATAGTGGTCCCCGTGAAGATGCAACTAGAATTGGTTCTGCTGGAGTGGTGCTCGGGAAGCTGCTTTCAGAAACATCAAGACAATTGCTGAATGCTTGGCCGATGAACTTATTAATGCAGCCAAAGGTTCATCCAATAGTTATGCTATCAAGAAAAAGGATGAAATTGAGAGAGTTGCCAAGGCTAATCGTTAAGCCAACCCAACAACCAGTATTGTGGCCAGAAAGATTTCGACCTTTGCTTTGGGCTGGCTTGGTTGCTGTAGATAAAGAGAAAGAGGAGACCACCGCTTGGCTTTCGACGATGTGTATAACGCACATGAGGCAAGTTTCCACCATTGCCTTCGGCGAGTGTTGCTTTTGTGCGAGAGAGGCCAATGACCTCAGCAAAAGACTGTCGAAGAAGCCCGATGATGAAGACAATTTAGGTCCTAGGGATTAA 786 0.4682 MAEIETTVPDPTQIDVKLFNRWSFEDVNDMSLADYIGVSPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVLGKLLSETSRQLLNAWPMNLLMQPKVHPIVMLSRKRMKLRELPRLIVKPTQQPVLWPERFRPLLWAGLVAVDKEKEETTAWLSTMCITHMRQVSTIAFGECCFCAREANDLSKRLSKKPDDEDNLGPRD 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01549 261 Pfam Ribosomal protein S7p/S5e 56 131 IPR023798 -
Gma02g01549 261 PANTHER RIBOSOMAL PROTEIN S7 4 133 IPR000235 GO:0006412
Gma02g01549 261 Gene3D Ribosomal protein S7 domain 3 143 IPR036823 -
Gma02g01549 261 PANTHER 40S RIBOSOMAL PROTEIN S5 4 133 - -
Gma02g01549 261 SUPERFAMILY Ribosomal protein S7 17 132 IPR036823 -
Gma02g01549 261 ProSitePatterns Ribosomal protein S7 signature. 68 94 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01549 Gma-Chr2 30894669 30899843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01549 2 132 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 81.955 7.41e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01549 K02989 - gmx:100803239 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01549 02 30894669 30899843 Gma02g01549 02 30894669 30899843 ECH