Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01544 ATGAAATTGCGCTCCAAGCCTTTCAAAATCCGGGGTTGTACATGGAGGCTCCTTGTGTATCCACTGAGGAGGGATGTGAATCACTTTTCAGTGTATTTGATGGTTGCTGATTCTTTACCGCCGTACGGATGGAGCAGAAACACTTTTTTCAAGTTAGCTCTAATAAATCAGGTGGATAGGAATAAGTCTATAGCTAAAGAGACACAACAAAAGTTCAATGGAGGATATCGTTGCTGGGGTTCATTTTTCTTGAATCTTACTGATTTCAATAACCCAAAACAAGGGTATCTTGTGAGGAACACATGCATAATCGAAGCACACATATGTGTCTCCGATTTAGCACCTAAGATTCAAGTCCACCCAAATAGTTCTCCCATCCATGACTCTTGTGATCAAGCAACAGAAGAATCATCCTCAGATGATAGGGACACCATTAGTCCAAGAACCTCAGGATCTAGTACTGCAGCAGAAGGTGAAATTCAAGGCTCAAACAATTTGACACTAAGAGAACTCATAGATTTTGAGAGTTTAGGAGCAGAAGAACAAGCATTCATTCCACTCTTGGAAGAGGTTTGCATATGGCACCCTAATCTGATAAAGTGCCAAAGGGAAAGGACTAGAAGGTTTAGACAATGGGCCTTTACTTCTTTGGGCCATGTTTTGCATTTTCTCAAGACCAAAAGGGTTAAAGACATCAATGAAGAGGACATAAAGTACCTTCATGGCTTGTGGAAGGAACTTGTGAAGTCCTCAGGGTTTGACCTGGCTTGGCTGGAGCCATATGTTCAATTAGCATTGGGTTCGAGGGCATATATGGAAAGAGCAAACCAATTGAAGAAGCTGAAGGACAAGGTGGTTGCTTTGGAGATTAAGATGAAGCGGCTCAGGGGGGAACTTGCTGCTGCTGAAGGAGAGTTTGAAGTGGCAAGGAGAGGCTTGTCTGAAGTAAGAAGAGGCTTCAATGAGATGGATTTAAATGCTGCAATTGGTTATGCTATGTTTTGA 1005 0.4229 MKLRSKPFKIRGCTWRLLVYPLRRDVNHFSVYLMVADSLPPYGWSRNTFFKLALINQVDRNKSIAKETQQKFNGGYRCWGSFFLNLTDFNNPKQGYLVRNTCIIEAHICVSDLAPKIQVHPNSSPIHDSCDQATEESSSDDRDTISPRTSGSSTAAEGEIQGSNNLTLRELIDFESLGAEEQAFIPLLEEVCIWHPNLIKCQRERTRRFRQWAFTSLGHVLHFLKTKRVKDINEEDIKYLHGLWKELVKSSGFDLAWLEPYVQLALGSRAYMERANQLKKLKDKVVALEIKMKRLRGELAAAEGEFEVARRGLSEVRRGFNEMDLNAAIGYAMF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01544 334 CDD MATH 2 108 IPR002083 GO:0005515
Gma02g01544 334 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 2 316 - -
Gma02g01544 334 ProSiteProfiles MATH/TRAF domain profile. 1 108 IPR002083 GO:0005515
Gma02g01544 334 SUPERFAMILY TRAF domain-like 3 112 - -
Gma02g01544 334 Pfam MATH domain 5 108 IPR002083 GO:0005515
Gma02g01544 334 MobiDBLite consensus disorder prediction 144 159 - -
Gma02g01544 334 MobiDBLite consensus disorder prediction 121 159 - -
Gma02g01544 334 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 123 IPR008974 GO:0005515
Gma02g01544 334 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 2 316 - -
Gma02g01544 334 Coils Coil 271 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01544 Gma-Chr2 30839745 30841316 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01544 - - gmx:100797919 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00810 10 11863855 11868034 Gma02g01544 02 30839745 30841316 GST
Gma02g01544 02 30839745 30841316 Gma19g01938 19 48536858 48538460 PCT
Gma02g01544 02 30839745 30841316 Gma03g01897 03 44887745 44889844 PCT