Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01531 ATGAAAAGGAGTAGAAGTTTTTCCTTACTCTTTTACCTGTACTTGTTGGTGATTGTCTTTTCTACCTTCTCTATAGTTTCCGTGGAAGCAAGGAAGACTAACACCAAGAAAAAACTTCACAAACCTCACAAAGGTGGTCACACTCGAGGGTCACATTCTCCATGTCCAATTCTAGCCCCTCAAGGGAGCACCTTTGATGTTTTGGCTTTTGGCGCCAAGGGAAATGGAGTTTCTGATGATTCAGAGGCACTTCTAGCTGCATGGAATCGTGCATGTAAAGTTGCTGGTGCTACAGTTAAAATTCCAGCACAACTCAAGTTCCTCATGAAACATGCTACTTTACAAGGAGTTGTGGATTTAAGGCTGTGGTGGCCAAGACTAGGTAGTTTTGGTGTAGTGGTGCTTGAGAGTGTAAGTGGACTTAAGGCTGTGGATTTTAGGCAACCTGAGGTACTATTGGTAAAGAAGGTTCATCAATTTGAGGTGACAAAAAGCCCACTTGAGGCATTAGCAGATATGGGACTAAATGGAGAGTACAATTTGAAGGAGTTAATGACATTGGCAGTGCATGTATCCACGCTCGTCACACGCACCGCTAATGATAAGTCCTCCGATTCGTTGGCGCTGCTAATGAAACTGACGAGTTATCATGAGCGACGGCCGTATGAATTCATAGTGGGAGCTCCACCGGGAAAGGAAAGGAAGCATGAATTTGTTGACAACCCAAATGGTTTATTCTCTGCTCAAGCAGCACCAAAACCTCCAACCTCCAGTTGCTATGTATGCAATACTGGAAGGAATGCATGGGAGGATGAGTGGTATTTCTTTACTCCTAGAGACAAGAAGTATCCCAATGGAGTGAGGCCTAATAAAGCAGCTGCTTCTGGTTATTGGAAGGCTATTGGGACTGACAAACCCATTTTCACTTCTTGTGGGATGAAGAGCATTACTGTCAAGAAGGCACTCGTGTTCTACAAGGGTCGTCCACCAAAGGGATCGAAAACCGACTGGATCATGCATGAGTATAGATTGCATGATTCCACGATCTCCAATTCAAAGCAAGAAGGGTCCATGAGAGTAGGCCAATTTCATGAGTTCAATTTTTCAATTTGGTGGTTTTTAATGACCAATAGAGTAAATTATTGA 1146 0.4346 MKRSRSFSLLFYLYLLVIVFSTFSIVSVEARKTNTKKKLHKPHKGGHTRGSHSPCPILAPQGSTFDVLAFGAKGNGVSDDSEALLAAWNRACKVAGATVKIPAQLKFLMKHATLQGVVDLRLWWPRLGSFGVVVLESVSGLKAVDFRQPEVLLVKKVHQFEVTKSPLEALADMGLNGEYNLKELMTLAVHVSTLVTRTANDKSSDSLALLMKLTSYHERRPYEFIVGAPPGKERKHEFVDNPNGLFSAQAAPKPPTSSCYVCNTGRNAWEDEWYFFTPRDKKYPNGVRPNKAAASGYWKAIGTDKPIFTSCGMKSITVKKALVFYKGRPPKGSKTDWIMHEYRLHDSTISNSKQEGSMRVGQFHEFNFSIWWFLMTNRVNY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01531 381 SUPERFAMILY NAC domain 270 350 IPR036093 GO:0003677|GO:0006355
Gma02g01531 381 SUPERFAMILY Pectin lyase-like 58 121 IPR011050 -
Gma02g01531 381 Pfam No apical meristem (NAM) protein 269 344 IPR003441 GO:0003677|GO:0006355
Gma02g01531 381 Gene3D - 56 138 IPR012334 -
Gma02g01531 381 ProSiteProfiles NAC domain profile. 207 366 IPR003441 GO:0003677|GO:0006355
Gma02g01531 381 PANTHER NAC TRANSCRIPTION FACTOR 56 270 360 - -
Gma02g01531 381 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 270 360 - -
Gma02g01531 381 Gene3D NAC domain 241 365 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01531 Gma-Chr2 30549118 30559548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01531 270 363 NAC Transcription Factor Family AT1G69490 69.149 4.58e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g01531 NAM 5.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01531 - - gmx:100784947 187.193