Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01520 GAGTATATGATTGATTTAGTTGGAAGACCTGGGGCAACATGCCAGCCTGATTCTTCACTGAATTCTGCATCTTCAATGTTGGTCCCTTCACCATTATGTCATCCAAAGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACACTAGCCCAATTGTATTTCTTGGACAGTGAAGCACTGCATCTTGTATTTGATACCACATCAGGACCTGCTGTTAATCATAGTGGCAGAATGGATCTACAGAAAACTGAAGCTCTGGGTGCAAATTATGCGGGTGGGAACAGCCATCTGATTGCTTTGATTCCTGGTGCAGAGGAATATGAGTCTTTCAATGAAGCAAACCAGTCAATAATGGATTACCCAAGTCATGAAGTTGATCTTGACAAGGAGGATCTGGATATTCCATGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACCGTCCTTCGTGCGGACTGGCGCGGTTCTGATGTTGCTGTGAAGATTCTTAAAGTGCAGGGTTTTGATCCTGGGCGATTTGAAGAATTTCTAAAGGAGGTCTCACTCATGAAGCGCCTCCGGCATCCAAACATTGTACTTTTGATGGGTGCAGTTATTCAACCCCCGAAGTTATCAATAGTAACAGAATATTTATCAAGAGGCAGTTTGTATGAACTTCTGCACATGCCCAATGTTGGATCATCACTTAGTGAAAAGCGTCGTTTAAGTATGGCTTATGATGTTGCAAGCGGAATGAATTATCTTCATCAAATGAGACCTCCTATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGATTTTGGCCTTTCACGTACAAAGGCAAACACATTTCTTTCATCTAAAACCGCTGCCGGAACTCCTGAATGGATGGCACCTGAAGTCATTCGAGGAGAACTGTCAAGCGAAAAATGTGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTAGTGACCCTGCAACAGCCATGGAGACAATTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTAGAGATTCCAGGGCATGTGAATCCTCAAGTGGCTGCCTTGATTGAGCTCTGCTGGGCCACGGAACACTGGAGACGACCTTCTTTCTCCTATGTTATGAAATGTTTGCAGCAAATAATTGCTGATGCTAAAGGGTGA 1209 0.4276 EYMIDLVGRPGATCQPDSSLNSASSMLVPSPLCHPKFKPVETAEYTKTLAQLYFLDSEALHLVFDTTSGPAVNHSGRMDLQKTEALGANYAGGNSHLIALIPGAEEYESFNEANQSIMDYPSHEVDLDKEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDPGRFEEFLKEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPNVGSSLSEKRRLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSSEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVGFMGKRLEIPGHVNPQVAALIELCWATEHWRRPSFSYVMKCLQQIIADAKG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01520 402 CDD STKc_MAP3K-like 145 391 - -
Gma02g01520 402 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 112 400 - -
Gma02g01520 402 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 82 - -
Gma02g01520 402 ProSiteProfiles Protein kinase domain profile. 139 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01520 402 SMART serkin_6 139 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01520 402 SUPERFAMILY Protein kinase-like (PK-like) 118 393 IPR011009 -
Gma02g01520 402 Gene3D Phosphorylase Kinase; domain 1 132 217 - -
Gma02g01520 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Gma02g01520 402 ProSitePatterns Protein kinases ATP-binding region signature. 145 166 IPR017441 GO:0005524
Gma02g01520 402 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672|GO:0006468
Gma02g01520 402 PRINTS Tyrosine kinase catalytic domain signature 301 311 IPR001245 GO:0004672|GO:0006468
Gma02g01520 402 PRINTS Tyrosine kinase catalytic domain signature 254 272 IPR001245 GO:0004672|GO:0006468
Gma02g01520 402 PRINTS Tyrosine kinase catalytic domain signature 364 386 IPR001245 GO:0004672|GO:0006468
Gma02g01520 402 PRINTS Tyrosine kinase catalytic domain signature 213 226 IPR001245 GO:0004672|GO:0006468
Gma02g01520 402 Pfam Protein tyrosine and serine/threonine kinase 140 393 IPR001245 GO:0004672|GO:0006468
Gma02g01520 402 Gene3D Transferase(Phosphotransferase) domain 1 218 401 - -
Gma02g01520 402 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 400 - -
Gma02g01520 402 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01520 Gma-Chr2 29774072 29795818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01520 1 400 MAP Kinase Kinase Kinase AT5G03730 59.322 1.98e-156 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma02g01520 PK_Tyr_Ser-Thr 3.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01520 K14510 - gmx:100807496 813.142