Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01519 ATGTATTGTAAGCAGGGTCCTCATTCTAATTTTGCTGGACAAACTTCAGGAAGCACTGCCTGCGTCACAATTATTAGAAACAACTATACTTTTGTAGCTAATGCCGGTTATTCACGTTGTGTGATATGTGGGAAGGGTCAGGCGTATGATTTGTCTATAGATCATAAACCTGATCTTGAGATTGAGAAGGAAAGAATCGTAAAAGTTGGTGGTTTTATTCATGCAAGAAGAGTTAATGGGAGTTTAAGCCTTGCAAGAGCAATAGTGGATTTAAGTGAGGAAGAACCTTGTTGGAGATGTGTGATAGGGAGTGGCATGCATGGTGCTAGAAATCCCGAGGGCATAGCTCCTTCTAGACATGATTATGTTGTTGTTAGTCTTCTAGGTGGGAGAATTCTAATATTTGGTGGGTTTATTGCTAGTCTCCACTCTACCTTTCAAATAACATTGGGTCTATTGCATATGTTCTAA 471 0.397 MYCKQGPHSNFAGQTSGSTACVTIIRNNYTFVANAGYSRCVICGKGQAYDLSIDHKPDLEIEKERIVKVGGFIHARRVNGSLSLARAIVDLSEEEPCWRCVIGSGMHGARNPEGIAPSRHDYVVVSLLGGRILIFGGFIASLHSTFQITLGLLHMF 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01519 156 Gene3D - 2 117 IPR036457 -
Gma02g01519 156 Pfam Protein phosphatase 2C 12 91 IPR001932 -
Gma02g01519 156 ProSiteProfiles PPM-type phosphatase domain profile. 1 156 IPR001932 -
Gma02g01519 156 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 10 91 - -
Gma02g01519 156 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Gma02g01519 156 PANTHER PROTEIN PHOSPHATASE 2C 10 91 IPR015655 GO:0004722|GO:0006470
Gma02g01519 156 CDD PP2Cc 8 91 IPR001932 -
Gma02g01519 156 SUPERFAMILY PP2C-like 12 93 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01519 Gma-Chr2 29619233 29620816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01519 4 91 PP2C-type Phosphatase Gene Family AT4G31860 70.455 8.06e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01519 K17499 - gmx:100793667 152.91