Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01511 ATGAAACTAAGGCCAGCAGATCCTTGCGACAAGCGGTGGTACACCCGCCACAAGCGCCTAGCCAACTACAGCATCGGCTTAGGCCGCAATGCCATCGGTGGCCGCGACGGGCGCTACTACGTGGTATCAGACCCTAACGACGACCACCTAGTAAACCCCAAACCCGGCCACCCTCCGCCACGCCGTGATCTAGGACAACCCCCTCTGGATCCTTGA 216 0.6019 MKLRPADPCDKRWYTRHKRLANYSIGLGRNAIGGRDGRYYVVSDPNDDHLVNPKPGHPPPRRDLGQPPLDP 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01511 71 PANTHER PECTATE LYASE 9 56 - -
Gma02g01511 71 MobiDBLite consensus disorder prediction 34 71 - -
Gma02g01511 71 Gene3D - 5 58 IPR012334 -
Gma02g01511 71 PANTHER PECTATE LYASE 18-RELATED 9 56 IPR045032 GO:0030570
Gma02g01511 71 MobiDBLite consensus disorder prediction 57 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01511 Gma-Chr2 29257603 29258271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01511 9 56 Polysaccharide Lyase AT5G48900 79.167 2.29e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01511 K01728 - gmx:100790659 92.0485