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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gma02g01500
ATGATGCATCGTCAGATTGAGATGGAGAATTCTGAGCTCTTCCAATTCCTCACAAACACCAACGATGCTTTCTTCAACACTGCATCATATGGCCTCCCTGCGGCACCTGCAGCATCAACCATGCAGCACAGCTTCTCTGGCTCCTTTTCTTATTACCCTTTGGAAGCATCTCATGATCATCATGCCCCTTCTCATGAAGACAAAGCCCTTGCTGCTTTGAGGAACCACAAAGAGGCTGAGAAGAGAAGAAGGGAAAGAATCAACTCCCACCTCGATAAGCTTCGCACCCTTCTTCCTTGCAATTCCAAGACGGACAAGGCTTCCCTTCTTGCCAAGGTGGTCCAACGGGTGAGGGAGTTGAAGCAGCAAATATCCTCACTATCCGATTCCGAAGCGTTTCCGTCGGAGACAGATGAGGTCTCCGTCTTGTCCACCAGCGGTGACAACGACGACCACGGTGGTTGTGACGACAATGACGGACGCCTCATATTCAAGGCCTCTCTGTGCTGCGAGGACCGCTCCGATCTCATCCCCGAGCTCATCGAAATCCTGAGGTCTCTGCGCCTGAAAACGCTCAAGGCCGAAATGGCCACGCTCGGAGGAAGAACCCGCAACGTTCTCGTGGTGGCCACGGATAAAGACCATAGCGGTGAATCGATCCAGTTTCTGCAGAACTCGCTGAAGTCTCTGGTGGAACGCTCCAGTAATTCCAACGACAGATCCAAACGGCGCCGTGTCCTAGACCGAAAGTTCATTGCTTAA
762
0.521
MMHRQIEMENSELFQFLTNTNDAFFNTASYGLPAAPAASTMQHSFSGSFSYYPLEASHDHHAPSHEDKALAALRNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQISSLSDSEAFPSETDEVSVLSTSGDNDDHGGCDDNDGRLIFKASLCCEDRSDLIPELIEILRSLRLKTLKAEMATLGGRTRNVLVVATDKDHSGESIQFLQNSLKSLVERSSNSNDRSKRRRVLDRKFIA
253
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gma02g01500
253
Gene3D
-
73
140
IPR036638
GO:0046983
Gma02g01500
253
Coils
Coil
110
130
-
-
Gma02g01500
253
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
74
131
IPR036638
GO:0046983
Gma02g01500
253
PANTHER
TRANSCRIPTION FACTOR BHLH30
9
252
IPR045847
GO:0003700|GO:0006355
Gma02g01500
253
MobiDBLite
consensus disorder prediction
233
253
-
-
Gma02g01500
253
MobiDBLite
consensus disorder prediction
128
152
-
-
Gma02g01500
253
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
71
120
IPR011598
GO:0046983
Gma02g01500
253
Pfam
Helix-loop-helix DNA-binding domain
75
120
IPR011598
GO:0046983
Gma02g01500
253
PANTHER
TRANSCRIPTION FACTOR BHLH106-RELATED
9
252
-
-
Gma02g01500
253
CDD
bHLH_AtAIG1_like
66
142
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gma02g01500
Gma-Chr2
27127475
27129249
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gma02g01500
51
237
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT2G41130
67.368
1.65e-74
225
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Gma02g01500
HLH
2.4e-11
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gma02g01500
-
K22484
gmx:100790009
487.648
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gma19g01233
19
41191892
41193548
Gma02g01500
02
27127475
27129249
PCT
Gma03g01177
03
37406729
37408410
Gma02g01500
02
27127475
27129249
PCT
Gma02g01500
02
27127475
27129249
Gma19g01233
19
41191892
41193548
PCT
Gma02g01500
02
27127475
27129249
Gma03g01177
03
37406729
37408410
PCT
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