Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01500 ATGATGCATCGTCAGATTGAGATGGAGAATTCTGAGCTCTTCCAATTCCTCACAAACACCAACGATGCTTTCTTCAACACTGCATCATATGGCCTCCCTGCGGCACCTGCAGCATCAACCATGCAGCACAGCTTCTCTGGCTCCTTTTCTTATTACCCTTTGGAAGCATCTCATGATCATCATGCCCCTTCTCATGAAGACAAAGCCCTTGCTGCTTTGAGGAACCACAAAGAGGCTGAGAAGAGAAGAAGGGAAAGAATCAACTCCCACCTCGATAAGCTTCGCACCCTTCTTCCTTGCAATTCCAAGACGGACAAGGCTTCCCTTCTTGCCAAGGTGGTCCAACGGGTGAGGGAGTTGAAGCAGCAAATATCCTCACTATCCGATTCCGAAGCGTTTCCGTCGGAGACAGATGAGGTCTCCGTCTTGTCCACCAGCGGTGACAACGACGACCACGGTGGTTGTGACGACAATGACGGACGCCTCATATTCAAGGCCTCTCTGTGCTGCGAGGACCGCTCCGATCTCATCCCCGAGCTCATCGAAATCCTGAGGTCTCTGCGCCTGAAAACGCTCAAGGCCGAAATGGCCACGCTCGGAGGAAGAACCCGCAACGTTCTCGTGGTGGCCACGGATAAAGACCATAGCGGTGAATCGATCCAGTTTCTGCAGAACTCGCTGAAGTCTCTGGTGGAACGCTCCAGTAATTCCAACGACAGATCCAAACGGCGCCGTGTCCTAGACCGAAAGTTCATTGCTTAA 762 0.521 MMHRQIEMENSELFQFLTNTNDAFFNTASYGLPAAPAASTMQHSFSGSFSYYPLEASHDHHAPSHEDKALAALRNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQISSLSDSEAFPSETDEVSVLSTSGDNDDHGGCDDNDGRLIFKASLCCEDRSDLIPELIEILRSLRLKTLKAEMATLGGRTRNVLVVATDKDHSGESIQFLQNSLKSLVERSSNSNDRSKRRRVLDRKFIA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01500 253 Gene3D - 73 140 IPR036638 GO:0046983
Gma02g01500 253 Coils Coil 110 130 - -
Gma02g01500 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 131 IPR036638 GO:0046983
Gma02g01500 253 PANTHER TRANSCRIPTION FACTOR BHLH30 9 252 IPR045847 GO:0003700|GO:0006355
Gma02g01500 253 MobiDBLite consensus disorder prediction 233 253 - -
Gma02g01500 253 MobiDBLite consensus disorder prediction 128 152 - -
Gma02g01500 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Gma02g01500 253 Pfam Helix-loop-helix DNA-binding domain 75 120 IPR011598 GO:0046983
Gma02g01500 253 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 9 252 - -
Gma02g01500 253 CDD bHLH_AtAIG1_like 66 142 - -
Gma02g01500 253 MobiDBLite consensus disorder prediction 128 148 - -
Gma02g01500 253 MobiDBLite consensus disorder prediction 235 253 - -
Gma02g01500 253 SMART finulus 77 126 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01500 Gma-Chr2 27127475 27129249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01500 51 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 67.368 1.65e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g01500 HLH 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01500 - K22484 gmx:100790009 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01233 19 41191892 41193548 Gma02g01500 02 27127475 27129249 PCT
Gma03g01177 03 37406729 37408410 Gma02g01500 02 27127475 27129249 PCT
Gma02g01500 02 27127475 27129249 Gma19g01233 19 41191892 41193548 PCT
Gma02g01500 02 27127475 27129249 Gma03g01177 03 37406729 37408410 PCT