Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01487 ATGAGAGAAGAGGACTCAAATTGGTTCTCAAGTTGGGAAGAGGAGCTCCCTCCCCCAGAGGAACTCATGCCTCTATCGCAAACCCTAATAAGCCATAACCTTGCAATAGCCTTTGACATAACAAACCCCTCACAGCAACAACAACAACAACAATATTCACAACAAGGACAAGAACAAGAACAACAACAACAATTTCCTCATCAAGTACCGGACAACATCGACGAGGAACCCGCACGCACCCTGAAGCGGCCACGCCTGGTGTGGACCCCACAGCTACACAAGCGCTTCGTGGACGCCGTGGCCCACTTGGGGATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGCTTGACCCGCGAAAACGTCGCGAGTCACCTGCAGAAGTACCGCCTCTACTTGAAGCGCATGCAGGGTTTGTCGGCCGGTGGCGGAGTTGGTAGGGTCGCCTCCGCCGACCCCACCACCGACCGCCTCTTCGCCAGCTCGCCCGTGCCGCCGCATTTCCTGCAGCGGCCGGGCTCCGACCACTTCTTGCCACTTGTGTCAGTGCCGGCGTTGCAGCAGCAGCAGCAGCGCCACCACCACCAGCACTTGGCAGTGGCAGCTTCCGCGGCAGCTGGCCACCGCCAATTTGGCTTGCCGCCGAATGGGCACTTTGAGCTTCCCATTTTATCGAGGATGGGGGCTCCGGTGCCGGGTTATGCGGCCGAGGATGTGGAATCCGGAGGGAGGAAGACAAATGCTACCGATGCAGGGACAAATGCAGCCAATGTGGCTACAATGGCGATTGTGGATATTTCAAAAAGTTGCTGCCAAAGTTGCGGTTGTGGACCAAATTTTAAAACAATGGCATTGGCCACGATTCAATGCAATTTAGATTCTAGTGTTACCATTGAGAAGTTTTCTGTCCGCATTGGTTGGAACAAGTTTGCTATTTATGAGCCTGAAGATAGTAATAAGTGCGCACTGTGCTTATTAGATATCAATGGAAGCATATCAGATTGCCACATTGATTGGTTTGTTGTTTTAAATCGCAAAGTGGATGAAGGCTTGGGTGGAGAAGACACTAGGGCTAGTCGTGCTATTCTTATGGCTTTGTTATCTGGACTTCCTCTTTTGGAGGAGTTGGTGTTAGATGTTTATAAAAATTTCAGAGTAGTTTTGCATTGGATGCGGTGGGTTCAAAGTGCAAGCAAATTGGATGTGATGGGTTCATAG 1233 0.515 MREEDSNWFSSWEEELPPPEELMPLSQTLISHNLAIAFDITNPSQQQQQQQYSQQGQEQEQQQQFPHQVPDNIDEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGVGRVASADPTTDRLFASSPVPPHFLQRPGSDHFLPLVSVPALQQQQQRHHHQHLAVAASAAAGHRQFGLPPNGHFELPILSRMGAPVPGYAAEDVESGGRKTNATDAGTNAANVATMAIVDISKSCCQSCGCGPNFKTMALATIQCNLDSSVTIEKFSVRIGWNKFAIYEPEDSNKCALCLLDINGSISDCHIDWFVVLNRKVDEGLGGEDTRASRAILMALLSGLPLLEELVLDVYKNFRVVLHWMRWVQSASKLDVMGS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01487 410 MobiDBLite consensus disorder prediction 43 82 - -
Gma02g01487 410 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 84 136 IPR006447 GO:0003677
Gma02g01487 410 MobiDBLite consensus disorder prediction 1 20 - -
Gma02g01487 410 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 251 IPR044841 GO:0003700|GO:0006355
Gma02g01487 410 Pfam Myb-like DNA-binding domain 87 135 IPR001005 -
Gma02g01487 410 SUPERFAMILY Homeodomain-like 80 140 IPR009057 -
Gma02g01487 410 Gene3D - 80 142 - -
Gma02g01487 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 139 IPR017930 -
Gma02g01487 410 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 251 - -
Gma02g01487 410 MobiDBLite consensus disorder prediction 43 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01487 Gma-Chr2 25439900 25444942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01487 1 236 G2-like Transcription Factor Family AT3G10760 56.204 2.80e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma02g01487 Myb_DNA-binding 3.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01487 - - gmx:100816747 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01487 02 25439900 25444942 Gma02g01487 02 25439900 25444942 ECH