Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01484 ATGTCGGATGAACTTCTTGTTGGAGGTGTTGAGAGTAGAAAGCTTAAACGTAAGATTGAGGAGGCATCTTCCACAGATGTAATAGATTCAGAGTTCGTATTGTCTCTAAGTCTTGGCAATAACAAAATGGTTGGTGAATCCTCATCTAATTTCTTATGCAAGTCATTGAAAAGCCATCAGGAGTCACCAGGTTTTGCTTCAAAACTTGTGGAAAACATCAATAATCATGTGATTATGCCTAAGCAGCGCCAATTCTCCTGCAAGTTTTGTGATAAGAAATTTTCAAGCTCTCAAGCTTTGGGGGGACACCAAAATGCTCACAAGCGTGAAAGAGTTATATCAAGGATGGATAAAGACATGGAAACTTTTGGACTTGGTGCTCACATGTGCTCATACTCATCTATTCCTCATCATCACCCCTTTCATGGACCAACACCCCTTTATTATGGGGCTAACATGCACCCCATGGCTCACATGTCGGCCATGCCTTGGCCAAATTTTGTACTTGACTTTGGCAACCAAGGATTGCGCACCACATCCATCTCAGGGAAACGATTTGGGATGGCCAACCCTTGGGGTATAGCTGCTGAAACTCCACCTAATGTGCATCGTAGGGATGTGGGATTTAATGTTGAGCATAATCAAGTTCCTTCACTTGATATAGCTCATAGAGCTGCAATGGCTCGTTCTGGCCTTAGTGGCCTTTTGGGAAATCAATATACTAGAAACCAATAG 735 0.4272 MSDELLVGGVESRKLKRKIEEASSTDVIDSEFVLSLSLGNNKMVGESSSNFLCKSLKSHQESPGFASKLVENINNHVIMPKQRQFSCKFCDKKFSSSQALGGHQNAHKRERVISRMDKDMETFGLGAHMCSYSSIPHHHPFHGPTPLYYGANMHPMAHMSAMPWPNFVLDFGNQGLRTTSISGKRFGMANPWGIAAETPPNVHRRDVGFNVEHNQVPSLDIAHRAAMARSGLSGLLGNQYTRNQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01484 244 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Gma02g01484 244 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Gma02g01484 244 Gene3D Classic Zinc Finger 66 123 - -
Gma02g01484 244 SUPERFAMILY beta-beta-alpha zinc fingers 82 112 IPR036236 -
Gma02g01484 244 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 244 - -
Gma02g01484 244 PANTHER ZINC FINGER PROTEIN JAGGED 1 244 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01484 Gma-Chr2 24850831 24851565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01484 69 158 C2H2 Transcription Factor Family AT5G10970 34.694 2.99e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma02g01484 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01484 - - gmx:102663144 493.812