Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01438 ATGAGAATGAATAAAGGGTCACTTGATTACTGGAGGAATTACTTTGGAGCTGCGAACTCTGATATATTTGGCATCATTGACCATGCGATCATGGTGGCTGCTTCTGATTGCCCCAAGGAGTTCAGGTTGAGGAGGGATGGGATTGCAGAGAGGTTGTTTTCTTGCAGATTGAGTCGATGTTTGGGATGTGAGAGGGTGGAATTGGCTGTGCCAGTGGATGATGATGATGATGGTGGTGGTGAAGGTTGCAAGAGTGGCTTTGATGGGGATGGTGACGAGTTCAAGTTTGAAGCGGGTGCAAGTAAAGAGAGCAAGGTCAATAGTGCCAGAGATTATCCTGGAGAGATGAACACGAACCAAGTTAGCAATTACAGCTATGGGGAAGCTGAGGCATTGACTGATGAGATTGAAAAAGAGTCTCAATACGTTGAGGAGGTGTTCAGAATCAAGGATATTTTCCTTAACTACGAAGAAGAGTCTGATTCAGTGTTGTTTGATTCATTGAGGAGGCTTCAGCTGATGGAACTCACAGTGGATCTTCTGAAGGCAACTGAAATTGGAAAGGCTGTCAATCCTCTTCGAAAGCATGGATCAAGAGACATTTGTCAACTTGCACGGACTCTTATTGATGGCTGGAAACAAATGGTGGATGAGTGGGTCAAGGATACCACAGCTATTGCAGGTTCAGAAGGTACTCCAGATTCAGTAAATCCATCTGTTGTTGATGATGAAGAAGGGCTTCCATCACCTCCTATGGATGAAGGGGCTTTATTTGCAGCTCCAACTGGTTCGATGGAACTCTCACAGTTCTTTGATGGCATGGATGATGATGGAAATCCTCAACACAGTGGGGAATTCATCAAGAACCATGAACATGGAAGAAGACCATCTCTGAACAGTCAAAATACAGCAAAGAGGAAACCTCAGGCATCAAATGAGGCAAACATCATTGCCAAGGACAGTAAGGGTCAGCAAGCAAAGAAAAACGAGGCTGCTGTGAGACCAAATAAATCAGTAATCGCTGATTCTGGCCCTAGCAGACCACCTAAATCAACCATGCAGAAGAAAGGCAACATTGAACCAAAGATGCAACAAAATATCGTGAAGAGTGCTATCCCAAGAAATCCTCACATTCATCAGCTAGATAAACCCAAGTGTTCAGACGATGCTGCTGTGCACGTAAAGTTAGAAGCCACTAAGAGAAAACTTCAGGAGCGTTATCAACAAGCTGAAAAGGCTAAGAGGCAGCGGACGGTACAGGTTATGGAGTTGCATGACCTCCCAAAGCAAGGGATTGGCCATCGAAATCCACATGTGAAACCCGGAAATCACAAGAGGCAATGGGGTCATGGACGAAGATAG 1362 0.4493 MRMNKGSLDYWRNYFGAANSDIFGIIDHAIMVAASDCPKEFRLRRDGIAERLFSCRLSRCLGCERVELAVPVDDDDDGGGEGCKSGFDGDGDEFKFEAGASKESKVNSARDYPGEMNTNQVSNYSYGEAEALTDEIEKESQYVEEVFRIKDIFLNYEEESDSVLFDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSRDICQLARTLIDGWKQMVDEWVKDTTAIAGSEGTPDSVNPSVVDDEEGLPSPPMDEGALFAAPTGSMELSQFFDGMDDDGNPQHSGEFIKNHEHGRRPSLNSQNTAKRKPQASNEANIIAKDSKGQQAKKNEAAVRPNKSVIADSGPSRPPKSTMQKKGNIEPKMQQNIVKSAIPRNPHIHQLDKPKCSDDAAVHVKLEATKRKLQERYQQAEKAKRQRTVQVMELHDLPKQGIGHRNPHVKPGNHKRQWGHGRR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01438 453 MobiDBLite consensus disorder prediction 224 360 - -
Gma02g01438 453 Pfam TFIIS helical bundle-like domain 168 216 IPR017923 -
Gma02g01438 453 MobiDBLite consensus disorder prediction 296 319 - -
Gma02g01438 453 CDD TFIIS_I 144 217 - -
Gma02g01438 453 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 134 227 IPR035441 -
Gma02g01438 453 ProSiteProfiles TFIIS N-terminal domain profile. 144 219 IPR017923 -
Gma02g01438 453 MobiDBLite consensus disorder prediction 425 453 - -
Gma02g01438 453 Coils Coil 393 420 - -
Gma02g01438 453 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 1 452 - -
Gma02g01438 453 MobiDBLite consensus disorder prediction 438 453 - -
Gma02g01438 453 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 1 452 IPR044805 -
Gma02g01438 453 MobiDBLite consensus disorder prediction 345 360 - -
Gma02g01438 453 SMART TFS2_5 143 218 IPR003617 GO:0005634
Gma02g01438 453 MobiDBLite consensus disorder prediction 278 295 - -
Gma02g01438 453 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 141 230 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01438 Gma-Chr2 17481764 17486714 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gma02g01438 Med26 1.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01438 - - gmx:100775579 903.664