Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01435 ATGGCATCAAGCTCAATGTCAGCTACTGGATCATGGAGTGCTAAGGACAACAAGGCCTTTGAAAGGGCTTTAGCTGTTTATGACAAGGACACCCCGGACCGTTGGAAAGATGTTGCCCGTGCTGTTGGCGGGAAAACTCCTGATGAAGTGAAGAGCCACTATGAGCTCCTCCTCAGAGACATTAGCCAAATTGAATCAGGCAAAGTGCCATACCCAAATTACAAGAAAAGTGCAGAGCATGATGAAGAGGAGAAAAGGATGAGAAACCTGAAGATCCAGTGA 282 0.4681 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWKDVARAVGGKTPDEVKSHYELLLRDISQIESGKVPYPNYKKSAEHDEEEKRMRNLKIQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01435 93 MobiDBLite consensus disorder prediction 69 93 - -
Gma02g01435 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 93 IPR044636 GO:0003700
Gma02g01435 93 CDD SANT 11 58 IPR001005 -
Gma02g01435 93 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 93 - -
Gma02g01435 93 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Gma02g01435 93 SMART sant 8 60 IPR001005 -
Gma02g01435 93 Pfam Myb-like DNA-binding domain 9 55 IPR001005 -
Gma02g01435 93 Gene3D - 2 71 - -
Gma02g01435 93 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Gma02g01435 93 Coils Coil 80 93 - -
Gma02g01435 93 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Gma02g01435 93 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01435 Gma-Chr2 17365123 17366086 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma02g01435 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01435 - - gmx:100777923 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01224 19 41084318 41084984 Gma02g01435 02 17365123 17366086 PCT
Gma03g01169 03 37256754 37258016 Gma02g01435 02 17365123 17366086 PCT
Gma02g01435 02 17365123 17366086 Gma19g01224 19 41084318 41084984 PCT
Gma02g01435 02 17365123 17366086 Gma03g01169 03 37256754 37258016 PCT