Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01407 ATGGTCGAAACCAGACGCGGCGCCTCTTCTTCCAAGTGTTCTCTCTCTTCTCCTTCTGCGCCCAACACCAAACGATCCAAGGTGTCCAAGGATTCCTTTGTGGCGGCTCCGGTCAACAAATCTGGGGAACCGGAGCTACGGCCCTCTGATCTGCCAGATACGGCGTCGTTGAAGGCCGTGGATGTTTGTGACGCGGTGTTGCCCGATAAGTCTCCTTCTGAAGGCGAGGCTTTGGTGCCTCCACGGTGTGCAGGTGAAACTGCGGAGAAATCGAAGGTGGCTGGTCTTCCCCCAAGGAGCGTGAAGAAACGTGCTGCGAAATCGTGCCCCAAGACTGCGTGGGGAAAGCTCCTCTCTCAGTgtttggaattaatctttttgttattcatgcttctccagaatcctcatgtgtGCATGACTGAACCTATCTTCACCGTTGGTCAAGGTCAACATTGTAATTTATGGCTTAAAGATCCCACCATTGGTAGTGTTTTGTGCAAGTTGAGCCACATAGAGCGTGGAAGTTCATCGGGTGCATTACTGGAAATCACAGGGAGCAAAGGTTCTATTCACGTTAATGGGAAGACTTATAGAAAGAATGCCTGTCTAATTTTAAGTGGAGGTGATGAGGTTGTCTTTGGTTCTTCTGCCAAGTATGCTTATATCTTTCAGCAGCTGACGAATAGTATCATTAGTACTGCTGATATAGCTTCTTCTGTGAGTATCTTGGAAGCCCAGAGTGCTCCAATAAATGGAATGCAAGTTGAAGCCAGATCTGGAGACCTTTCTGCTGTTGCTGAAGCATCTATATTGGCATCTTTATCTAATAATATTTGTAAAGAATTATCTCTCCTACCACCTGCTGCTAAAACTGGCAAGAATGTGCAGCAGAACACTGACATTTCATCACTACATTCTGGCTGCGGGGATGATATCACAGACAATGAAATGAGTGATACCACCAATAATGATGAACCAGCTGGAGATTTTTCTGCTGATAAAACTGTTCTTGGATCCTCTACCACTGTTAACGAAAATCCTAACCTTGGCTCAGCAGAAGTCGATACCAATATTGATGCAGATGTTGGGAAGATGACTACTGCTACATATGAGTTGAGGCCATTACTGCGCATGCTTACTGGATCATGTCCTGAATTTGATTTAAGTGGTAGCATTTCCAAGATATTGGAAGGGCAAAGGGAATTAAGAGAACTTCTTAAAGATGTTGATACCCCAACAGTATTGGCATCAACCAAGCGACTAGCATTTAAGGACAGTTTACAACAGAGAATTCTCAAAGCTGAGAAGATTGATGTCTCATTTGAAACTTTCCCATATTATCTAAGTGATACAACAAAGAACGTTTTGATTGCTTCTACATTTATTCATTTGAAGTGCAAAGGCTTTGGAAAATATGCTTCAGACCTCCCATCAGTGTCTCCACGAATAGTGTTATCTGGTCCTGCAGGTAGTTCGGAAATATATCAGGAGACTTTGTCCAAGGCACTTGTGAAGCATTTTGGTGCCAGGCTACTAATTGTGGATTCTCTTTCACTGCCTGGTGGATCACCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTCTGGGGCTGAAAAACCATCTGTGTTTTCTAGGAAGAGAAATTTCCAGACTGCCATGTTACAGCATAAAAAACCAGCCTCTAGTGTTAATGCTGAAATTATTGGTGGACCCATGCTAATTTCTAGTGCATCATCGAAAGGCGCTACTCTTAGAAAGGGTGATCGAGTAAAATTTATTGGTAGCTTTCCTTCGGCTGTCTCATCACTACCAAATTATATTTCAAGGGGACCAAGTTATGGCTCCCGGGGCAAAGTTCTCCTAGCTTTTGAAGATAACGGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGAAATGATCTTGGTGGCCTTTGCGAAGATGACCATGGGTTCTTCTGTTCTGCAAATCATTTACTACAAGTAGACGGCTCTGGAGGGGATGATCTTGACAAAGTTGCAATTAATGAAATCTTTGAGGTTGTTGCCTCTAATCAGAGTAAAAGTGGTGCACTCGTGTTGTTCATTAAAGATATAGGGAAGGCAATGATTGGCAACTACGAAATTTTAAAAAGTAAATTTGAAAGCTTGCCACCAAATGTTGTGGTAGTTGGTTCTCACACCCAGTTGGATAATCAAAAGGAGAAGGCTCAACCTGGCAGTCTTCTGTTTACCAAGTTTGGAAGCAATCAGACAGCACTACTTGATCTTGCTTTTCCGgataactttagtagactgcatgatagaagcaaagaaacctcaaaagttatgaagcaacttaatcgcctttttccaaacaaagtgaccatacagttgcctcaggacgaggctttactctctgactggaagcagcagttagatcgtgacattgaaactATGAAAGCTCAGTCCAATGTTGTCAGCATTCGCTTAGTTCTCAACAGAATTGGATTGGATTGCCCTGACCTTGAGACTCTCTGCATCAAAGACCACACCCTAACGACTGAGAGTGTGGAGAAGATCATTGGATGGGCTTTAAGTTACCATTTTATGCATTCATCTGAAGCTTCAATCAGAGATTCTAAGCTTGTAATATCTGCAGAAAGCATTAAGTATGGACATAAAATTCTACAGGGCATTCAAAATGAGAACAAGAACATGAAAAAATCACTTAAGGACGTGGTTACTGAGAATGAATTTGAGAAAAAACTACTTACTGATGTTATTCCACCGACTGATATTGGGGTCACATTTGACGATATTGGAGCTTTAGAAAATGTTAAGGAAACCTTGAAGGAATTGGTCATGCTTCCTCTTCAAAGGCCTGAATTGTTTGGCAAAGGACAGCTGGCCAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTGGCAACTGAAGCTGGAGCAAATTTTATTAACATTTCAATGTCCAGCATTACATCCAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAACATGAGGCTATGCGTAAAATGAAGAATGAATTCATGGTTAATTGGGATGGTTTGAGAACAAAAGATAAAGAGCGTATACTTGTTCTTGCTGCTACAAATAGACCTTTTGATCTTGATGAGGCTGTTATTAGGAGACTTCCACGAAGATTGATGGTTAATTTGCCAGATGCTCCAAATAGAGGAAAAATTGTCAGAGTTATTTTAGCAAAAGAAGATTTGGCACCTGATGTTGATTTTGAAGCAATAGCAAATATGACTGATGGATATTCAGGAAGTGACCTAAAGAATCTCTGTGTCACAGCAGCTCAATGTCCAATAAGACAGATCTTGGAGAAGGAAAAGAAGGAGAGAAGCTTAGCATTGGCTGAGAACCAACCTTTACCTCAGTTGTGTAGTAGTACTGACGTTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGGTTTGTGCTAGTGTGTCATCGGAGTCAACAAATATGAGTGAACTACTCCAATGGAACGACCTTTACGGAGAAGGTGGATCAAGAAAAATGAGATCTTTGAGCTATTTCATGTAA 3714 0.3961 MVETRRGASSSKCSLSSPSAPNTKRSKVSKDSFVAAPVNKSGEPELRPSDLPDTASLKAVDVCDAVLPDKSPSEGEALVPPRCAGETAEKSKVAGLPPRSVKKRAAKSCPKTAWGKLLSQCLELIFLLFMLLQNPHVCMTEPIFTVGQGQHCNLWLKDPTIGSVLCKLSHIERGSSSGALLEITGSKGSIHVNGKTYRKNACLILSGGDEVVFGSSAKYAYIFQQLTNSIISTADIASSVSILEAQSAPINGMQVEARSGDLSAVAEASILASLSNNICKELSLLPPAAKTGKNVQQNTDISSLHSGCGDDITDNEMSDTTNNDEPAGDFSADKTVLGSSTTVNENPNLGSAEVDTNIDADVGKMTTATYELRPLLRMLTGSCPEFDLSGSISKILEGQRELRELLKDVDTPTVLASTKRLAFKDSLQQRILKAEKIDVSFETFPYYLSDTTKNVLIASTFIHLKCKGFGKYASDLPSVSPRIVLSGPAGSSEIYQETLSKALVKHFGARLLIVDSLSLPGGSPSKEVDSAKESSGAEKPSVFSRKRNFQTAMLQHKKPASSVNAEIIGGPMLISSASSKGATLRKGDRVKFIGSFPSAVSSLPNYISRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDHGFFCSANHLLQVDGSGGDDLDKVAINEIFEVVASNQSKSGALVLFIKDIGKAMIGNYEILKSKFESLPPNVVVVGSHTQLDNQKEKAQPGSLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETSKVMKQLNRLFPNKVTIQLPQDEALLSDWKQQLDRDIETMKAQSNVVSIRLVLNRIGLDCPDLETLCIKDHTLTTESVEKIIGWALSYHFMHSSEASIRDSKLVISAESIKYGHKILQGIQNENKNMKKSLKDVVTENEFEKKLLTDVIPPTDIGVTFDDIGALENVKETLKELVMLPLQRPELFGKGQLAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRGKIVRVILAKEDLAPDVDFEAIANMTDGYSGSDLKNLCVTAAQCPIRQILEKEKKERSLALAENQPLPQLCSSTDVRPLKMEDFRYAHEQVCASVSSESTNMSELLQWNDLYGEGGSRKMRSLSYFM 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01407 1237 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1237 - -
Gma02g01407 1237 MobiDBLite consensus disorder prediction 522 543 - -
Gma02g01407 1237 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1237 - -
Gma02g01407 1237 SMART AAA_5 969 1106 IPR003593 -
Gma02g01407 1237 ProSitePatterns AAA-protein family signature. 1076 1095 IPR003960 GO:0005524|GO:0016887
Gma02g01407 1237 Pfam AAA+ lid domain 1126 1161 IPR041569 -
Gma02g01407 1237 CDD AAA 971 1104 - -
Gma02g01407 1237 Pfam ATPase family associated with various cellular activities (AAA) 973 1102 IPR003959 GO:0005524|GO:0016887
Gma02g01407 1237 SUPERFAMILY SMAD/FHA domain 135 219 IPR008984 GO:0005515
Gma02g01407 1237 MobiDBLite consensus disorder prediction 1 53 - -
Gma02g01407 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 932 1210 IPR027417 -
Gma02g01407 1237 Gene3D - 931 1211 IPR027417 -
Gma02g01407 1237 Coils Coil 893 913 - -
Gma02g01407 1237 Gene3D - 1105 1199 - -
Gma02g01407 1237 Gene3D - 131 230 - -
Gma02g01407 1237 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01407 Gma-Chr2 16249515 16265658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01407 968 1173 Calmodulin-binding Proteins AT3G56690 35.714 4.57e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01407 - - gmx:100800938 2379.36