Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01379 ATGGGGTCGAAACCGTGGCTATACCCTGCTCCAACCTATCGAACTATAGAAACCTTCTGGGTCACCGATGAAGACGCACCCGGCCCTCGCTGTGGCCACACCCTCACCGCCGTTGCCGCCACCAAGACTCAAGGCCCCCGCTTGATCCTATTCGGCGGCGCAACCGCCATTGAAGGAGGATCTTCCTCTGCCCCCGGCATTCGGTTAGCGGGAGTCACTAATACCGTCCATTCCTATGACGTTCAAAGTAGAAAATGGACTAGTATCAAACCCGCCGGAGAGCCGCCGTCTCCTCGGGCTGCTCATGCTGCTGCTGCAGTTGGTACCATGGTTGTTTTTCAGGGTGGGATAGGTCCAGCGGGGCATTCTACCGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCATAGGGTCGTTGTACAAGGGCAAGGACCCGGGCCTCGCTATGGCCATGTAATGGACCTGGTTGCTCAGAGATATCTAGTAACTGTCAGCGGAAATGACGGAAAAAGAGTTGTATCTGATGCTTGGGCTTTTGATACTGCTCAAAAACCTTATGTGTGGCAGAAGCTGAACCCAGAAGGTGACAGACCTTCTGCAAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTGCTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTCGGTGCACGATTACATGTTACAGGTGGTGTTCTCAGGGGTGGACGGTCCGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTAGATAGAAACGGCATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGTCATGCAGCTGCAGCTGTTGGTGTTCATATATTTATCTATGGTGGTTTAAGAGGAGATATACTACTAGATGATTTCCTAGTGGCTGAAAATTCGCCATTGCAGCCTGACATTAATTCTCCTGAGAGAGCTTCACCTGTTACAAGCTCCAAACAAAATCAATCTAACTTAAATTATAATGTAACAACACCAAATTTGGATGGTGGACCAGATATTCCTTCATCTGGTGGCTCAGGCATGGACAAAAATTCCTTGGAGAAACTGAGGGAAGCATCAGCTGCTGAAGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTGTGCAGGCTATATCAAGTAATCCTGCTGAAGAAACATCTGTGTCAGATGACAACTCACAAGCTGTGGAAACAGTTTCAGATGGAAGTGATACAGAGGGAGATGTCCGCCTTCATCCTAGAGCTGTTGTAGTTGCGAAGGAGGCTTTAGGTAACCTAGGTGGAATGGTGAGACAATTATCGCTAGATCAATTTGAAAATGAAAGTAGACGCATGATTCCCGTAAATAATGATTTGCCATATCCTACGAAAAAGTTCACCAGGCAGAAATCTCCTCAGGACCATCTCTTATTATCACTGTCTTCCTGCCAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAACTTTGCTATGCTGCTGAGCAAATATTTATGCATGAACCGACCGTACTTCAGCTGAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATCACCTATATTGACTACCTGTTTTTGGGAGATTATGTCGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGGCAGGCCTGTTTAATTTTACATTATTTAACTATCTGATCGAATATCCCGAGAATGTTCACTTGATACGTGGAAACCACGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATTGAGTGCATTGAAAGAATGGGTGAAAATGATGGGATATGGGCATGGACACGATTCAATCAACTTTTTAACTATCTTCCATTAGCTGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGATCGATCAATTCAGTAGAACAGATAGAGAAGCTTGAAAGGCCCATAACAATGGATACAGGATCTATTACTTTAATGGACCTTTTATGGTCTGATCCCACAGAGAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGCCCAGGGCTTGTTACTTTTGGGCCTGATCGTGTCACAGAATTTTGTAAGAAAAATAAATTGCAGCTCATTATAAGGGCCCATGAGTGTGTCATGGATGGCTTTGAACGATTTGCCCAGGGACAATTAATCACCCTTTTCTCTGCAACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTAGTTGGTAGGGGTTTGGTTGTAGTTCCAAAATTAATTCATCCCATACCACCTCCCCTTCAGTCTCCTGAGACATCTCCTGAGCGTGTTATGGATGAAACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCTCAGCCGGACCTTGATCGTGGCTCACTAGCATATATATGA 2700 0.4593 MGSKPWLYPAPTYRTIETFWVTDEDAPGPRCGHTLTAVAATKTQGPRLILFGGATAIEGGSSSAPGIRLAGVTNTVHSYDVQSRKWTSIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWAFDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPSLELMRRCRHAAAAVGVHIFIYGGLRGDILLDDFLVAENSPLQPDINSPERASPVTSSKQNQSNLNYNVTTPNLDGGPDIPSSGGSGMDKNSLEKLREASAAEAEAASAVWQAVQAISSNPAEETSVSDDNSQAVETVSDGSDTEGDVRLHPRAVVVAKEALGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQDHLLLSLSSCQIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKAGLFNFTLFNYLIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDTGSITLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01379 899 PIRSF STPPP_BSU1 1 899 IPR012391 GO:0004721|GO:0009742
Gma02g01379 899 SMART pp2a_7 556 852 IPR006186 GO:0016787
Gma02g01379 899 MobiDBLite consensus disorder prediction 360 410 - -
Gma02g01379 899 Pfam Galactose oxidase, central domain 115 155 - -
Gma02g01379 899 ProSitePatterns Serine/threonine specific protein phosphatases signature. 665 670 IPR006186 GO:0016787
Gma02g01379 899 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 899 - -
Gma02g01379 899 MobiDBLite consensus disorder prediction 874 899 - -
Gma02g01379 899 Gene3D - 195 387 IPR015915 GO:0005515
Gma02g01379 899 Pfam Serine-threonine protein phosphatase N-terminal domain 535 582 IPR031675 -
Gma02g01379 899 MobiDBLite consensus disorder prediction 439 466 - -
Gma02g01379 899 MobiDBLite consensus disorder prediction 360 396 - -
Gma02g01379 899 MobiDBLite consensus disorder prediction 439 459 - -
Gma02g01379 899 SUPERFAMILY Kelch motif 73 357 IPR015915 GO:0005515
Gma02g01379 899 Gene3D - 526 871 IPR029052 -
Gma02g01379 899 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 899 - -
Gma02g01379 899 PRINTS Serine/threonine phosphatase family signature 584 611 IPR006186 GO:0016787
Gma02g01379 899 PRINTS Serine/threonine phosphatase family signature 702 728 IPR006186 GO:0016787
Gma02g01379 899 PRINTS Serine/threonine phosphatase family signature 619 646 IPR006186 GO:0016787
Gma02g01379 899 PRINTS Serine/threonine phosphatase family signature 814 830 IPR006186 GO:0016787
Gma02g01379 899 PRINTS Serine/threonine phosphatase family signature 664 688 IPR006186 GO:0016787
Gma02g01379 899 PRINTS Serine/threonine phosphatase family signature 792 812 IPR006186 GO:0016787
Gma02g01379 899 PRINTS Serine/threonine phosphatase family signature 732 759 IPR006186 GO:0016787
Gma02g01379 899 SUPERFAMILY Metallo-dependent phosphatases 528 860 IPR029052 -
Gma02g01379 899 Pfam Galactose oxidase, central domain 29 96 - -
Gma02g01379 899 Gene3D - 10 194 IPR015915 GO:0005515
Gma02g01379 899 Pfam Calcineurin-like phosphoesterase 584 803 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01379 Gma-Chr2 15958602 15969353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01379 585 795 Calmodulin-binding Proteins AT5G63870 32.231 6.08e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01379 K01090 - gmx:100805538 1715.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01379 02 15958602 15969353 Gma02g01379 02 15958602 15969353 ECH
Gma10g00218 10 1999077 2009745 Gma02g01379 02 15958602 15969353 GST