Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01373 ATGAAGGAAAAGGTGGATTCCCCAGTGACAGTGCTTGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCCAAAGAGCCTTCAGCGGATTCtgagtctcgagagttttccaaatctgcttctaggtggcatgagtctcgagagttttccaaatctgcttctaggtggcatgCATTTCTTCAATTATTGAGGAGCGGATCGAAGAAACAGATGAACACCTTACATCCTCTCAGTGTCCTCAAGCTCTCAAAAAGAATGAGCACTAGCATGAGGGAGTCCATTCTCCCAAGTTGTCTCTTAGATGCTACTGCTTCCCCCTGCAGGTCACCTTGGAAGATATTTACTCATCATGAGATTCAAGTTGCAACCAATTCTTTTAGCCAAGAAAATTTGATTGGGAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCGTCAGCTTGTGGCAGTTAAACGGTTAACAAGAGGAACAGCTGATGAAATCATAGGGGATTTCTTATCAGAACTTGGCGTAATGGCGCATGTAAACCATCCCAATACTGCTAAGTTGGTTGGTTATGGAGTGGATGGTGGAATGTATCTAGTTCTTGAATTGTCTGAAAAAGGAAGCCTTGCTTCAGTTCTTTACGGTTCCAAGGAGAAACCACCATGGTTTATTAGGCACAAAATTGCATTAGGAACAGCAAAGGGTATATTATATCTCCATGAGGGATGTCAAAGAAGAATTATCCACAGGGATATAAAAGCTGCCAATATCTTACTCACGGAGGACTTTGAGCCTCAGATATGTGATTTCGGGCTAGCAAAATGGCTACCAGAAAATTGGACTCACCACACCGTTTCAAAATTCGAAGGAACTTTCGGTTACCTAGCACCTGAATACTTGCTGCATGGCATAGTAGACGAGAAAACGGACGTATTTGCCTTTGGTGTATTGCTATTAGAATTAGTGAGTGGGCGAAGAGCACTTGATTATTCACAGCAAAGCCTTGTGTTGTGGGCAAAACCATTGCTGAAAAAAAATGATATTATGGAGCTTGTTGATCCTTCACTAGCAGGTGACTTCGACTCTAGGCAAATGAATCTTATGCTCTTGGCTGCTTCTTTATGCATACAACAGTCCTCAATTCGTCGCCCCTCTACAAGACAGGTTGTACAGCTTCTGAATGGGAACCTTAGCTGCTTCAAGGGCATGAAGAAAACTCGAATGCCTTTTTTCCGAAGAGTGTTTAGGGAAGAACTCCTTGATTCTGATTAG 1272 0.3978 MKEKVDSPVTVLEDYFRSSDSESSSSKEPSADSESREFSKSASRWHESREFSKSASRWHAFLQLLRSGSKKQMNTLHPLSVLKLSKRMSTSMRESILPSCLLDATASPCRSPWKIFTHHEIQVATNSFSQENLIGKGGYAEVYKGCLPNRQLVAVKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKPPWFIRHKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIMELVDPSLAGDFDSRQMNLMLLAASLCIQQSSIRRPSTRQVVQLLNGNLSCFKGMKKTRMPFFRRVFREELLDSD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01373 423 Gene3D Transferase(Phosphotransferase) domain 1 205 406 - -
Gma02g01373 423 ProSiteProfiles Protein kinase domain profile. 128 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01373 423 PANTHER OS08G0249100 PROTEIN 1 421 - -
Gma02g01373 423 SUPERFAMILY Protein kinase-like (PK-like) 109 393 IPR011009 -
Gma02g01373 423 MobiDBLite consensus disorder prediction 27 41 - -
Gma02g01373 423 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 421 - -
Gma02g01373 423 MobiDBLite consensus disorder prediction 1 41 - -
Gma02g01373 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Gma02g01373 423 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Gma02g01373 423 Pfam Protein kinase domain 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01373 423 SMART serkin_6 128 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01373 423 Gene3D Phosphorylase Kinase; domain 1 103 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01373 Gma-Chr2 15903121 15906859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01373 115 389 Trihelix Transcription Factor Family AT1G68690 41.958 2.10e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma02g01373 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01373 - - gmx:100802873 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01373 02 15903121 15906859 Gma03g02223 03 47556379 47566552 ECH
Gma02g01373 02 15903121 15906859 Gma10g01549 10 42566487 42577405 ECH
Gma02g01373 02 15903121 15906859 Gma02g01373 02 15903121 15906859 ECH
Gma02g01373 02 15903121 15906859 Gma10g00224 10 2060473 2064206 ECH
Gma15g00942 15 7859179 7862732 Gma02g01373 02 15903121 15906859 ECH
Gma10g00224 10 2060473 2064206 Gma02g01373 02 15903121 15906859 GST
Gma19g01436 19 43631927 43634815 Gma02g01373 02 15903121 15906859 PCT
Gma03g01370 03 39872119 39874639 Gma02g01373 02 15903121 15906859 PCT
Gma02g01373 02 15903121 15906859 Gma19g01436 19 43631927 43634815 PCT
Gma02g01373 02 15903121 15906859 Gma03g01370 03 39872119 39874639 PCT