Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01355 ATGACCATCTCACTGTTTATGTGCAGAGTAACACAACCCATAATAAATGTTCCTTGCAGTGGGAAAAAACTGATCGTGAGGCAAATTGAGAAAGAGAAAGTAGTGGTTGTAATGGGAGCCACCGGAGCAGGGAAGTCAAGGCTTTCAATTGACCTAGCAACATGTTTTCCATCAGAAATCATAAACGCCGACAAAATCCAAGTCTTCGAAGGTCTAGACATAGTCACAAACAAAATCTCCAAGGAAGAGCAACGCGGGGTTCCGCACCACTTACTAGGAACAATAAAGCCCAACATGGATTTCAGCGTCAACGATTTCTGTGACACGTCATCAGAGGCCATTGACTCAATCACGAGGTGCCAGAAGCTTCCAATCGTCGTTGGAGGCTCAAACTCGTATCTGGAGGCCCTCATGGACGACGACGATTACAAGTTCCGATCGCGCTACGATATTCTCTGCCTCTGGGTTGACGTGGAAATGTCCGTGCTTAAGTCCTACGTGGCAGACCGTGTCGACCACATGTTTTATAAAGGAATGGTCGATGAGCTGAGACCGTTTTATAGTCCCAACGGGGATTACTCGCGAGGGGTGAAAAGGGCAATTGGGGTGCCCGAGTTCCACGAGTATTTTGGGAGGGAAGAGGTTGCTGACGAGGAGACAAAACAGAGGTTGTTGGAACAAGCGGTTAAGGAAATCAAACTGAACACGTGCAAGCTAGCGATGAAGCAGTTGGGGAAGATTCGTAGGCTCAGGAACGTTAAGAGATGGCATATTCATCGATTGGATGCTACGCCCGTCTTCCGAATGCGTGGGGAAGAAGCCAACGATGCTTGGAAGAGGCTGGTGGCAAAGCCTAGTGCTTTGATCGTTGCTCGCTTTCTCTATAATAACAACTCCAAAAATAATGCCAACGTTGTTTCTGGTTCTGGACTTAGAGTGCAACCAGCTGCTTCAGAGAGTGTTCTCGCTGCCGCAACTTGCTAG 984 0.4797 MTISLFMCRVTQPIINVPCSGKKLIVRQIEKEKVVVVMGATGAGKSRLSIDLATCFPSEIINADKIQVFEGLDIVTNKISKEEQRGVPHHLLGTIKPNMDFSVNDFCDTSSEAIDSITRCQKLPIVVGGSNSYLEALMDDDDYKFRSRYDILCLWVDVEMSVLKSYVADRVDHMFYKGMVDELRPFYSPNGDYSRGVKRAIGVPEFHEYFGREEVADEETKQRLLEQAVKEIKLNTCKLAMKQLGKIRRLRNVKRWHIHRLDATPVFRMRGEEANDAWKRLVAKPSALIVARFLYNNNSKNNANVVSGSGLRVQPAASESVLAAATC 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01355 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 24 304 - -
Gma02g01355 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 187 IPR027417 -
Gma02g01355 327 Pfam IPP transferase 67 140 - -
Gma02g01355 327 Pfam IPP transferase 146 248 - -
Gma02g01355 327 Gene3D - 31 294 IPR027417 -
Gma02g01355 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 304 IPR039657 -
Gma02g01355 327 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01355 Gma-Chr2 15697302 15698664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01355 147 294 C2H2 Transcription Factor Family AT2G27760 32.571 4.13e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01355 K10760 - gmx:100799145 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01355 02 15697302 15698664 Gma02g01355 02 15697302 15698664 ECH
Gma10g00242 10 2226056 2227261 Gma02g01355 02 15697302 15698664 GST
Gma19g01462 19 43846581 43847831 Gma02g01355 02 15697302 15698664 PCT
Gma03g01399 03 40119512 40120441 Gma02g01355 02 15697302 15698664 PCT
Gma02g01355 02 15697302 15698664 Gma19g01462 19 43846581 43847831 PCT
Gma02g01355 02 15697302 15698664 Gma03g01399 03 40119512 40120441 PCT