Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01354 ATGGAAGATCAAAGTAACCAAGAGAACCCAGGAAGAACCACCAGTGGTGTCTCTCATCATCAATTTCCAATCCCAAAAGTTGCCATTGCAGCATCTTCTGGAAGAAATGGAAGCCACAGGACTTGCCTCCCAAAACTAACTCACCATAACTATGTTGAGTATCTTTCAGAATCCTCAACTTATAATCTTCCAAAGACTTCCACCGAATTCATGATGAAGAGCAGTTATCTACCTGTTGGCAACATCAGTGATGGTTATGGGGTCAGTGGAACAGACAGAAACTTCTTTTACAGTGATGATCCAGGAAAAGCTTGTTCCTTTAAGACTATTGGTTCTTCAAGTAATGACCTTGACATTAGTAAGCAGGTGGGGTTTTGGAGAGCTGATGAAGGAATCAAAGTTGAAACTGAAAGTAGTCAGAATCTTGTTTATGCTGAGAGTCATGCATCATGGACATCAGATTCTGTTGGAGATAAGCATAATGCTTCACATGATCCAATGTTCATGGTTGGTGCACCTACTTTACTTCCCAAACCAGGATGCAGCTCCTCAAAACAGAAAGCTCGTGTCACTGAACGTCAACGCAGGCAACGCATCGCTGATAACCTCAAAGCCTTGCATGAATTGCTTCCAAATCCAGCAGAGGGAAGTCAAGCTTACGTATTGGACGACATAATTGACTATGTCAAATATTTGCAGCTTCAAATAAAGGAACAAAGTGGAAGTAGATTATTGCAAGCGGACTCAACTGCTATACCACTAGTTTTTCATGAGGGTTACGGCCATTATATCAACCAAAAGATGCTGAATGAACCCCTTGAGGAGATAATGGGGAAACTAGTTGAAGATGATTCAGCAGCAGCTGTTCAGCTACTAGAGAGTAAGGGTCTTTTCCTGCTGCCTATGGCATTGGTTGATGAGTTGAGTGAGGCTGTGCAAATGTTTGGTGGGAGTGCACTTGTCTGA 966 0.4244 MEDQSNQENPGRTTSGVSHHQFPIPKVAIAASSGRNGSHRTCLPKLTHHNYVEYLSESSTYNLPKTSTEFMMKSSYLPVGNISDGYGVSGTDRNFFYSDDPGKACSFKTIGSSSNDLDISKQVGFWRADEGIKVETESSQNLVYAESHASWTSDSVGDKHNASHDPMFMVGAPTLLPKPGCSSSKQKARVTERQRRQRIADNLKALHELLPNPAEGSQAYVLDDIIDYVKYLQLQIKEQSGSRLLQADSTAIPLVFHEGYGHYINQKMLNEPLEEIMGKLVEDDSAAAVQLLESKGLFLLPMALVDELSEAVQMFGGSALV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01354 321 MobiDBLite consensus disorder prediction 1 20 - -
Gma02g01354 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 305 - -
Gma02g01354 321 Gene3D - 181 242 IPR036638 GO:0046983
Gma02g01354 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Gma02g01354 321 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 24 305 - -
Gma02g01354 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 242 IPR036638 GO:0046983
Gma02g01354 321 SMART finulus 189 238 IPR011598 GO:0046983
Gma02g01354 321 CDD bHLH_AtbHLH_like 191 238 IPR045239 -
Gma02g01354 321 Pfam Helix-loop-helix DNA-binding domain 185 233 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01354 Gma-Chr2 15687987 15689969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01354 190 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 39.259 2.43e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g01354 HLH 2.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01354 - - gmx:100788949 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01354 02 15687987 15689969 Gma02g01354 02 15687987 15689969 ECH