Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01352 ATGGATAATTCCAACCTTCAACGTCTCTTCACTCTCTTCCTTTTTTCCCTAATTGCACCCTCTTTGGCTCAACAATCCTTCAGACCCAGAGCCCTCGTTGTCCCAGTTAAAAAAGACGCTTCCACCCTCCAATATATTACTCAAATCAAACAAAGAACACCACTCGTCCCAGAAAACCTAGTACTTGACATCGGTGGCCAATTCCTGTGGGTCGATTGCGACAACAACTACGTCTCCTCCACTTACCGCCCCGCACGGTGTGGCTCCGCCCAGTGCTCCCTCGCCAGATCCGACAGCTGCGGAAACTGCTTCTCCGCCCCAAAACCCGGCTGCAACAACAACACGTGCGGCGTCACGCCAGACAACACCGTCACCGGCACCGCCACCAGCGGCGAGCTCGCGCAAGACGTCGTCTCCCTCCAATCCACCAACGGTTTCAACCCTATACAAAACGCCACCGTTTCGCGCTTCTTATTCTCCTGCGCTCCAACCTTCTTACTCCAAGGCCTCGCCACCGGTGTCAGCGGCATGGCCGGTCTCGGCAGAACTAGAATTGCTCTCCCCTCGCAGCTCGCTTCCGCTTTCAGCTTCCGTAGAAAATTCGCCGTCTGCCTCTCATCTTCAAACGGCGTCGCTTTCTTCGGTGACGGACCCTACGTTCTTCTCCCCAACGTCGACGCTTCTCAGCTACTCACCTTCACGCCGTTATTAATTAACCCCGTTAGCACCGCCTCTGCTTTCTCCCAGGGAGAGCCTTCCGCCGAGTATTTCATCGGCGTGAAATCGATTAAAATCGACGAAAAGACAGTGCCGTTAAACACCACTTTGTTGTCCATAAACAGCAAAGGCGTTGGTGGAACCAAGATTAGTTCCGTTAACCCTTACACTGTTTTGGAGGATTCTATCTTCAAAGCGGTGACGGAGGCTTTCGTGAAAGCTTCTTCTGCTAGGAACATAACGAGGGTGGCTTCTGTGGCGCCGTTTGAGGTGTGCTTCAGTAGGGAGAACGTGCTCGCCACGCGGTTGGGGGCGGCGGTGCCAACTATTGAGCTTGTGCTGCAGAACCAGAAGACGGTTTGGAGGATTTTTGGAGCGAACTCGATGGTTAGTGTGAGCGATGATAAGGTGCTATGCCTTGGGTTTGTGAATGGAGGTGAGAATCCGAGGACTTCGATAGTGATTGGAGGATATCAGCTGGAGGATAATCTTTTGCAGTTCGATTTGGCTACTTCAAGATTGGGATTCAGCTCTTTGCTCTATGGAAGCCGAACTACGTGTGCTAACTTCAACTTTACCTCCGCTGCGTAG 1308 0.5252 MDNSNLQRLFTLFLFSLIAPSLAQQSFRPRALVVPVKKDASTLQYITQIKQRTPLVPENLVLDIGGQFLWVDCDNNYVSSTYRPARCGSAQCSLARSDSCGNCFSAPKPGCNNNTCGVTPDNTVTGTATSGELAQDVVSLQSTNGFNPIQNATVSRFLFSCAPTFLLQGLATGVSGMAGLGRTRIALPSQLASAFSFRRKFAVCLSSSNGVAFFGDGPYVLLPNVDASQLLTFTPLLINPVSTASAFSQGEPSAEYFIGVKSIKIDEKTVPLNTTLLSINSKGVGGTKISSVNPYTVLEDSIFKAVTEAFVKASSARNITRVASVAPFEVCFSRENVLATRLGAAVPTIELVLQNQKTVWRIFGANSMVSVSDDKVLCLGFVNGGENPRTSIVIGGYQLEDNLLQFDLATSRLGFSSLLYGSRTTCANFNFTSAA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01352 435 PANTHER ASPARTYL PROTEASE-RELATED 9 434 IPR001461 GO:0004190|GO:0006508
Gma02g01352 435 SUPERFAMILY Acid proteases 36 425 IPR021109 -
Gma02g01352 435 Gene3D Acid Proteases 217 433 IPR021109 -
Gma02g01352 435 Pfam Xylanase inhibitor C-terminal 255 416 IPR032799 -
Gma02g01352 435 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 9 434 - -
Gma02g01352 435 Pfam Xylanase inhibitor N-terminal 45 216 IPR032861 -
Gma02g01352 435 Gene3D Acid Proteases 29 216 IPR021109 -
Gma02g01352 435 CDD xylanase_inhibitor_I_like 51 419 IPR033868 -
Gma02g01352 435 ProSiteProfiles Peptidase family A1 domain profile. 45 416 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01352 Gma-Chr2 15662828 15664507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01352 59 417 Miscellaneous Gene Families AT1G77480 23.097 4.79e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01352 - - gmx:100797018 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01352 02 15662828 15664507 Gma19g02240 19 51117433 51118734 ECH
Gma02g01352 02 15662828 15664507 Gma03g02204 03 47406045 47407449 ECH
Gma02g01352 02 15662828 15664507 Gma02g01352 02 15662828 15664507 ECH
Gma10g00245 10 2253824 2254955 Gma02g01352 02 15662828 15664507 GST