Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01333 ATGCCAAGCACAAGAAATCTGAAGCACCTGAACATGTGTTGTTCAAATTCAGCTACTCCTGAATATGAATCTCCTCCATTGAGCCCCATAACTATTTCCTCAAATCACAATATCACTACTCCTTCTTCAATTATGATAAAGAACTTCAACTCTATCTATGACCACTCTTTCAGTTCCACGACCACCTTCTTTgaacccgaacccgaacccgaacccgCTGATTTCGCCACCGCCTTCGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGTCTCTCCAATTCCCTAGTTGAATACAACAATACCAACAAAAGTACTACTCAACACTTACCACCATTGTTGAGAGAAGATAGTGGTGATGTTGATGAGAAGAAGAAGAAGAAGGTGTTGTTCAAGGGGAGCGTGGCGGTGGCGACGTACTCGCCGGACCCTTACGTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGGCCGGAGCTGATGGACGTGAAGTCCAATTGGAACGTCCTTCACGAGCTTCTTCTATGCTATCTTGCGCTGAATCCAAAGAGCACTCACAAGTTCATTCTTGGAGCCTTCGCTGATCTCCTCGTTAGCCTCATGTCATTCTAG 615 0.4537 MPSTRNLKHLNMCCSNSATPEYESPPLSPITISSNHNITTPSSIMIKNFNSIYDHSFSSTTTFFEPEPEPEPADFATAFASQRFFFSSPGLSNSLVEYNNTNKSTTQHLPPLLREDSGDVDEKKKKKVLFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01333 204 ProSiteProfiles OVATE domain profile. 136 200 IPR006458 -
Gma02g01333 204 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 134 202 IPR006458 -
Gma02g01333 204 PANTHER TRANSCRIPTION REPRESSOR OFP12 7 203 - -
Gma02g01333 204 Pfam Transcriptional repressor, ovate 140 201 IPR006458 -
Gma02g01333 204 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 203 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01333 Gma-Chr2 15485902 15486641 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma02g01333 Ovate 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01333 - - gmx:102660213 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00264 10 2433351 2434016 Gma02g01333 02 15485902 15486641 GST
Gma19g01487 19 44220067 44221117 Gma02g01333 02 15485902 15486641 PCT
Gma03g01430 03 40513983 40514946 Gma02g01333 02 15485902 15486641 PCT
Gma02g01333 02 15485902 15486641 Gma19g01487 19 44220067 44221117 PCT
Gma02g01333 02 15485902 15486641 Gma03g01430 03 40513983 40514946 PCT