Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01316 ATGATTCCGAAAACTCCGTCACGGCACCTGTTACTCGCGCTAGGGTTTCTGCTTTGCGCCACAATCCCCTTCGTTCACGGCGAGTCGTCTACGTGCCTGACTGTCTACAAGAACGGCGGTGCTCCGGCGGTGTTCCAATCCCCAAAATGCCCCCGCTGGAAGCTCTCCGATTACGATTCCCCTCCCCAAACCACCGCGCGTTGCCAAACCGCCATGCTCCAAGGCCGCAGAAACTCGCAAGAGGATCGCGCTCTCTGCGTCCTCGATGTTCGCATTCCCTTCCCCGGTCCGAACGGGATCAAGGAGGTTGCGGTCGGGATTGTGGCAGTTTTCGATGGTCATAACGGTGCGGAAGCTAGTGAGATGGCGTCGAAGCTTTTGGTGGAGTATTTCGTTCTGCACACTTATTTTCTTCTCGATGCCGCCTTTTCTGTTATTTCAAAGACGTCGACAGAGACTTTGCTTCACAAGAGAGATCGTGATCATGTAAACCTACTGCATAGATGGAAGGAGATTCTAGGGTTGGAATGGCATGAACTGCATTTTGAAAGGTTTCAGAATACATTTTCTCCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAGTCCATGACATCGATGCAAAGTTTTCTGAGGAAGCCTCTAGAAATAATCTTCACTCAGGATCTACAGCAACCGTTGTTTTGGTAGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATCTTGTGCTCTGAAAATTTTCAGTCTCCCAGAGAGGCTAAAGACTTGTTATTAAAGCTATACAGGCAGAAAGAGCATGATGGTTCTGTTTCCGTGTGGGATCGTGAAAAGTACAGATTGGTTTCCTCCCATGGTCTCACTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCAGACAGAGATGATGAAAGAATTCGGGTGGAAACAGCTGGTGGTCAAGTTCAAAATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGATGTACTCTTTAAAAGTTATGGTGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTGACTGCTAATGATAGCTTTTTGGTGGTAGCATCAGATGGTGTATTTGAGAAGATGAGCGTGCAGGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTCAGTAACATGAGATCTGAGTGTACCCCTGCATCTTCCTATTCTTTGGCAGATTTAATTGTTAATACTGCCTTCAAAAAGGGCAGTATGGACAATGTGGCAGCAGTTGTCATTCCTCTTGAGTCTGCCAAATCTTCTGCAAACTCGCTTAGGGGAAGCTATAGTGGAAAGAGGGATGCAGATTTTCCATTGTTTGGTCAGCAGGAAACTGCTTCCAAAAGCTCAGTTAATGACATCGGGTCTGATCTTATACACTTGGAGCACCCTCATCTGGTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTAAAAGATGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTCGATGAACCAGAGGACTCTAAGCAGATTGCCAAAAAAACTGACTGGGAAGACTATTTGTATGAACTACCTCAGCCTCTACCAGATGCCCTTCATCAACATGCCACTCCTGGTGGTCCTGTAAATTTATACAATAGCCAAAACTTTTGCTTTCACCTTGGTCCAACTATTAGTGAAGCCGAAGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTCATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCCAGTAATGGGTCTGCTGATTATTCAATGCCCGATTTAAGGTATGTATTGAAGAAGAGTTTTGGACGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATCAAGATAGTAATTCTGCAAAAATGAGCAAGGATGACAAAAATACAACCAGCAGCTCAACTGCTTCTGATTGTCAGGATGGTTCTACTAACTACACCCTGTACATTTTGAAGCGTATAATGGTGGAGAGGGGGTCTGCTGTTTACTTAAGTGGGCTGAGGGAGAAGTATTTTGGAGAAATTTTCTTAAATGCCTCTACATGCTTTGAAGATCCTCTATCAGCTGGCAAATCAAACTGTGTCTTAGAAACATCACAGTTTGGTCCTGAGAAATCATTTCCAAACAAATTTCGGCTACAACGAACCACATATGAAGAAGGTTTGAATCATATTGCAAGATATGTGGAGTCTTTTGAGTCTCAAGCCAATGAAATATGGCTTGTATTTAGTTATGAAGGTTTGTCATTGTCAAAACTTTTATATGCCGTGGAAGATGCGTATGGTACTGCTGAGAAAGAAAGACTTGAGCAAGCTAAACATGTTCAGATACTACGTCCATCAAAGTGGTGGCATTGGTTAAAAACAGCAGAAGAAGGGCAAGCAGAAATGCGCAACCTTATCTGGCAGCTGTTATTAGCTCTCAAGTCCTGTCATGATCGCAACATCACACACAGAGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAAACAGGGAGATGCTTGAAAGAGATTCCCACTAAAGTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGATGAATTTACATTAAAGCATTTATATGGTTCCACTGGGCCTTCTAGAGCTGAACAAACCTATGAGTATACTCCTCCTGAAGCTTTGCTGAATGCTACATGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGACATGTGGAGCGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAAATGTCTTCCAGATAAATGCTTTAACACGTGCTCTTTTAGACAGACAACTAGAAGGTTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGAATTTCCAGGTCCAGCAGTTCCTCAAAAAAGTATCAAAAGGTGAACCAAGTTGGAGTTTCACCTGCATCTTGGAAATGCTCCGAAGAATTCTTCTCTCGTCAAATTAGGAATCGAGATCCCCTAAAAATAGGTTTTTCAAACATCTGGGCGTTACGGTTAGTGCGCCATCTGTTACATTGGGATCCAGAGGATCGGCCAAGTATTGATGAGGCTCTGCAACATCCTTATTTCCAACATCCCCCAAGAGAATGA 3231 0.4284 MIPKTPSRHLLLALGFLLCATIPFVHGESSTCLTVYKNGGAPAVFQSPKCPRWKLSDYDSPPQTTARCQTAMLQGRRNSQEDRALCVLDVRIPFPGPNGIKEVAVGIVAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDAAFSVISKTSTETLLHKRDRDHVNLLHRWKEILGLEWHELHFERFQNTFSPNFDDSFHLEILKEALLRAVHDIDAKFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAILCSENFQSPREAKDLLLKLYRQKEHDGSVSVWDREKYRLVSSHGLTHFAVKELTSDHHPDRDDERIRVETAGGQVQNWGGVPRINGQLAITRAIGDVLFKSYGVISAPEVTDWQPLTANDSFLVVASDGVFEKMSVQDVCDLLWEVHRFSNMRSECTPASSYSLADLIVNTAFKKGSMDNVAAVVIPLESAKSSANSLRGSYSGKRDADFPLFGQQETASKSSVNDIGSDLIHLEHPHLVDTKFKRILVEVKDGDFGCFYLSENLDEPEDSKQIAKKTDWEDYLYELPQPLPDALHQHATPGGPVNLYNSQNFCFHLGPTISEAEDQCINPEGFASFIGLLESIPLHDTGSSNGSADYSMPDLRYVLKKSFGRGSYGEVWLAFHWNCNQDSNSAKMSKDDKNTTSSSTASDCQDGSTNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASTCFEDPLSAGKSNCVLETSQFGPEKSFPNKFRLQRTTYEEGLNHIARYVESFESQANEIWLVFSYEGLSLSKLLYAVEDAYGTAEKERLEQAKHVQILRPSKWWHWLKTAEEGQAEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQINALTRALLDRQLEGWNEGVKELAYKLRSFMELCILIPGISRSSSSSKKYQKVNQVGVSPASWKCSEEFFSRQIRNRDPLKIGFSNIWALRLVRHLLHWDPEDRPSIDEALQHPYFQHPPRE 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01316 1076 SMART PP2C_4 59 439 IPR001932 -
Gma02g01316 1076 SMART serkin_6 618 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01316 1076 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Gma02g01316 1076 ProSiteProfiles Protein kinase domain profile. 618 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01316 1076 Gene3D - 63 449 IPR036457 -
Gma02g01316 1076 SUPERFAMILY Protein kinase-like (PK-like) 617 1072 IPR011009 -
Gma02g01316 1076 ProSiteProfiles PPM-type phosphatase domain profile. 67 441 IPR001932 -
Gma02g01316 1076 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 21 605 - -
Gma02g01316 1076 CDD PP2Cc 74 441 IPR001932 -
Gma02g01316 1076 Gene3D Transferase(Phosphotransferase) domain 1 810 1071 - -
Gma02g01316 1076 PANTHER ALPHABET, ISOFORM E-RELATED 21 605 - -
Gma02g01316 1076 Pfam Protein kinase domain 819 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01316 1076 Pfam Protein phosphatase 2C 200 434 IPR001932 -
Gma02g01316 1076 SUPERFAMILY PP2C-like 66 442 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01316 Gma-Chr2 15280807 15293309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01316 682 1074 PP2C-type Phosphatase Gene Family AT3G63340 64.304 6.05e-176 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Gma02g01316 Pkinase 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01316 - - gmx:100781476 2167.12