Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01309 ATGAGTCACCTACCATCAAACTTGTTGCCCGTTGACGGAAGCCCAGAGTGGATGAACAGGGGTGACAACACGTGGCAGCTGACGTCAGCTACTCTGGTGGGCCTGCAAAGCGTTCCGGGCCTGGTCATCCTCTACGGCAGCATAGTGAAGAAGAAATGGGCTTTGAACTCTGCCTTCATGGCCCTCTACGCTTTTGCGGCGGTTCTTGTTTGTTGGGTTGGGTGGTGCTACAAAATGTCATTCGGCGAGAGGATCCTTCCATTTCTGGGACAGCCAAACACGGCCTTGGACCGGGAATTCGTTTTTCGCAAAACTTTTGCTGGGGAATTTCCCAACGCCACCATGGTGTACTTTCAGCTGGTTTTTGCTGCCATCACGTTGATTCTCATAGCGGGGGCGTTGCTTGGGAGAATGAACTTTTATGCATGGATGTTGTTTGTTCCATTATGGGTTACGTTCTCTTACACCATTTGTGCCTTCAGTATATGGAGCACCGATGGATGGTTGTTCAAGATGGGCCTCATTGATTATTCTGGTGGCTTTGTTATTCACCTTTCTTCTGGGGTTGCTGGTTTCGTCGCAGCATGTTGGGTAGGACCAAGGGCAGTGAAGGACAGAGAGAGGTTCCCTCCAAACAACATACTTCTGATGCTGGCTGGGGCTGGCTTACTATGGATGGGTTGGTCTGGATTCAACGGTGGAGATCCATACGCAGCCAGCATAGATGCATCTCTGGCCGTGCTTAACACCCACGTGTGCACAGCAATGAGCTTGTTGACTTGGCTTTTCCTTGACATCCTCTTCTTTGGAAAACCTTCCGTCATTGGTGCCACTCAAGGCATGATCACTGGCCTTGTTTGCATCACCCCTGCTGCCGGTGTGGTGCAAGGTTGGGCAGCAATCATAATGGGAATGATGTCCGGAAGCATCCCATGGTACACAATGATGGTCCTGCACAAAGAAAAAGATTCCCTACATTATACGGGTCTTGTTTATGGCATATTCAATGGGAGGCCAAATGCAGGGTTCAGGCAAATGATGGTTCAGCTTCTTGGCATTGTGTTTGTGATACTTCTCAATGTCACCACAACTAGCATTGTGTGCTTGTTGGTTAGGATCATAGTTCCACTTAGGCTGAGTGAAGATGACTTGCAAGTTGGGGATGAAGCAGTCCATGGCGAAGTTGCATATGCATTGTGGGGTGATGGAGAGAAGCTTGAGACTGCTACTGAGCCTTTGACATCTGAAAAGAATCTTGAATGGCCAACTGTGGAACTAAGAACTTAA 1287 0.4887 MSHLPSNLLPVDGSPEWMNRGDNTWQLTSATLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVLVCWVGWCYKMSFGERILPFLGQPNTALDREFVFRKTFAGEFPNATMVYFQLVFAAITLILIAGALLGRMNFYAWMLFVPLWVTFSYTICAFSIWSTDGWLFKMGLIDYSGGFVIHLSSGVAGFVAACWVGPRAVKDRERFPPNNILLMLAGAGLLWMGWSGFNGGDPYAASIDASLAVLNTHVCTAMSLLTWLFLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAIIMGMMSGSIPWYTMMVLHKEKDSLHYTGLVYGIFNGRPNAGFRQMMVQLLGIVFVILLNVTTTSIVCLLVRIIVPLRLSEDDLQVGDEAVHGEVAYALWGDGEKLETATEPLTSEKNLEWPTVELRT 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01309 428 Pfam Ammonium Transporter Family 25 397 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gma02g01309 428 Gene3D Ammonium transporter AmtB like domains 11 417 IPR029020 -
Gma02g01309 428 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 323 418 - -
Gma02g01309 428 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 4 322 - -
Gma02g01309 428 PANTHER AMMONIUM TRANSPORTER MEP2 323 418 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma02g01309 428 PANTHER AMMONIUM TRANSPORTER MEP2 4 322 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma02g01309 428 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005887
Gma02g01309 428 PRINTS Rhesus blood group protein signature 215 233 IPR002229 GO:0005887
Gma02g01309 428 PRINTS Rhesus blood group protein signature 246 268 IPR002229 GO:0005887
Gma02g01309 428 PRINTS Rhesus blood group protein signature 342 358 IPR002229 GO:0005887
Gma02g01309 428 SUPERFAMILY Ammonium transporter 17 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01309 Gma-Chr2 15193263 15195407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01309 113 420 Inorganic Solute Cotransporters AT2G38290 54.678 4.97e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01309 K03320 - gmx:112999382 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00292 10 2696134 2699300 Gma02g01309 02 15193263 15195407 GST