Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01283 ATGACAGACATATTTGAGAAGCACCAATCTTCTGATTCTTCAAATTATGCATCAAGTAGTGGCCTATGTGAGGAAGATAAGGAGATTGGGTATAGAGCTGCAACATCAAAGCACAGATATGTTTTGGCTAACAACTCTGCTCTTAAATTCATACCCATCAAAATTGACCTGAATTGTGCTCGCATGGTGATGGCTGAGGTGGTGGGTACTTTTATTTTGATGTTCTGTGTGTGTGGAATCACTGCAAGCACACGATTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTGGTGATTATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTGAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATATGTAGGTAGCCTTGTATACGGCATAAAATCAGATGCTATGATGACCATGCCACTCCAAGGGTGCAACTCTGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTCCTCGTTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGAATGGCAATTGGGCTTGCTGTACTAATCACAGGCCCAGTCTCCGGTGGAtcaatgaatcctgcaagatcattaggtccagcaattctctcatggaaattcaagaacatatggatatacatggtagccccCAGTGGTGGAGCTATAGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTCGAGACCAACATTCTAGTACTTTGTCCTCCCCAAACATCATTGATGTTGGTCGTTCCATACCCTTTTGCTCAAAGTATAATGGCAAGCCCACATTCACAGAGATCGTGGTGGCTTCCTCTATTGGGTTGATATTTGCCGCAGCAATGCATTATCGCGTTAAAACAAATAGGGATCGACAGATCATGCCACGTCTGAGAAAATCAAAGGCAAACCAAACCCCAAAGCTTGAAAAGTTCTCTCATTACGTAGCTAGGCAAATGGGGTTGAAAGACAGGAGAAGTTGTCCTCTTCTTTGTAAATTGGCTTCTGAATACATAAGGAATTCAGAGGATTGTGAAGATGATCTCTACGCCTTCTTCGAGAACGAACCAGATGCGGATTCACTTTCAGTCAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGACCCATGGTGATGTTTTGATAAGTCAGGTGTTTAGCTCTGAAGTTGAACCAAAAGCGAAGCTCAGGCACATAGTTATGGCGGCAACTAGGGAACAAAGGTTCGAGAGAGTGACCAAGAATCTGAAGGTGGCTAGAGTTTTCAACACATTAGTGGAAGAGATGAAAGCAATGGGACTTGCCACAAATGATGACTCTCAATGCACAGAGGTGATGGCTCCAGTAGCACACTGTGATAGGAGCCCAGTGCTTCTTTTCATGGGTGGTGGCATGGGAGCTGGCAAGAGCACTGTGCTTAAGGACATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGTAATGCCGTAATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTCAGTGCAAGAGGGCATCAGGACATGATTCGAACAGCTGAACTGGTACACCAATCATCCACTGATGCAGCCTCATCCCTCCTAGTAACAGCACTAAATGAGGGGCGTGATGTAGTTATGGATGGCACACTCTCCTGGTTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGTTACCGCATGGGACCTGGCTACAAGGTAAACGAGGATGGAACTGTGACCGAAAACTATTGGCAGCGAATTGAGGGGGAAGGGCCAGAACTAGTTGGAGGCAAAATGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTATGTGATGCTTATCTTGCAGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAAGTCACAATTGACATCTCACAAGAGATTTGCTGATGCATTTCTGACTTATTGCCAGCTTGTAGACAATGCCCGGCTATACAGTACAAATTCTTTGGAAGGCCCACCTAAGTTGATAGGATGGAAAGATAGAGACAAGACATTGCTCGTTGATCCAGATGAAATAGATTGTTTGAAGAGGATTTCTACGTTGAATGAAAAGGCCAACAACATATATGAACTTTACAAGCACCCCAACCCAACTTGTGAAGCTGGATCGATATGGAAAGACATTGTACTATCTCCTTCAAGGTTGAACATCCAACAAGAGCTGAAGTATTCAATCCAAAAGGTTGAGAAAATAAAATGTACTAGTAGCTCTTTATGA 2421 0.4275 MTDIFEKHQSSDSSNYASSSGLCEEDKEIGYRAATSKHRYVLANNSALKFIPIKIDLNCARMVMAEVVGTFILMFCVCGITASTRFQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQFPWLKVPVYIIAQTVGSMSATYVGSLVYGIKSDAMMTMPLQGCNSAFWVEVIATFIIMFLVAALTSESQSVGHLSGFVAGMAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAIAGAAMFRFLRLRDQHSSTLSSPNIIDVGRSIPFCSKYNGKPTFTEIVVASSIGLIFAAAMHYRVKTNRDRQIMPRLRKSKANQTPKLEKFSHYVARQMGLKDRRSCPLLCKLASEYIRNSEDCEDDLYAFFENEPDADSLSVKLVEEFERCILSYFAFHWTHGDVLISQVFSSEVEPKAKLRHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLATNDDSQCTEVMAPVAHCDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYKALSARGHQDMIRTAELVHQSSTDAASSLLVTALNEGRDVVMDGTLSWLPFVVQTITMARNVHRRRYRMGPGYKVNEDGTVTENYWQRIEGEGPELVGGKMRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLTSHKRFADAFLTYCQLVDNARLYSTNSLEGPPKLIGWKDRDKTLLVDPDEIDCLKRISTLNEKANNIYELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKYSIQKVEKIKCTSSSL 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01283 806 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 295 803 - -
Gma02g01283 806 CDD MIP 61 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 MobiDBLite consensus disorder prediction 1 20 - -
Gma02g01283 806 Pfam Zeta toxin 497 606 IPR010488 GO:0005524|GO:0016301
Gma02g01283 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 632 IPR027417 -
Gma02g01283 806 PANTHER UNCHARACTERIZED 295 803 IPR044802 -
Gma02g01283 806 SUPERFAMILY Aquaporin-like 58 275 IPR023271 -
Gma02g01283 806 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Gma02g01283 806 Pfam Major intrinsic protein 59 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g01283 806 Gene3D Glycerol uptake facilitator protein. 24 280 IPR023271 -
Gma02g01283 806 Gene3D - 484 720 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01283 Gma-Chr2 14932062 14939871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01283 56 274 Major Intrinsic Protein MIP AT4G10380 42.466 8.44e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01283 - - mtr:MTR_1g070385 1330.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01283 02 14932062 14939871 Gma02g01283 02 14932062 14939871 ECH
Gma19g01530 19 44635351 44640423 Gma02g01283 02 14932062 14939871 PCT
Gma03g01472 03 40938198 40941679 Gma02g01283 02 14932062 14939871 PCT
Gma02g01283 02 14932062 14939871 Gma19g01530 19 44635351 44640423 PCT
Gma02g01283 02 14932062 14939871 Gma03g01472 03 40938198 40941679 PCT