Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01277 ATGGTTTACTCCTTCTATGACAAAACCTCTTCTTCTTCTGGCTCCGATATTTCGGGGTTGTTCAATCCTACTTTGCATAACCTTGGAGCTTGCAATGACTTGTCATCATCACCACATTCTTTGGTATTTGAGAGTGATAAGGGAGAGCTGGTGAAGTGCCTTGCAGCTGCAAAGGTAGGGAAGAGTGAGATTTGTGAGGCCAAAGCTTTGGCTGCTTTGAAGAACCACAGTGAAGCAGAGAGGAGGAGGAGGGAGAGAATAAACGGTCATCTTGCAACACTACGTGGCCTTGTGCCATCCACTGAAAAGATGGATAAAGCCACTTTACTGGCTGAAGTGATTAGCCAAGTGAAGGAGTTGAAGAAAAATGCAGCGGAAGTAAGCAAGGGTTTTCTGATTCCAAAGGATGCTGATGAAGTGAAAGTTGAACCATATAATGATCATGAGGGAGGAGAAGGATCCATGTCTTACAGTGCAACTATCTGCTGTGATTTCAGACCTGAAATACTATCTGACCTAAGACAGACCCTTGATTCCCTTCCACTGCATCTAGTCAAGGCAGAAATTTCAACTTTGGCAGGTAGGATGAAGAATGTGTTTGTCTTCACTTGTTGCAAAGAAAACATTAATAATATTGATTTTGAAAAATGCCAAGCTCTTGCAAGTACTGTTCACCAGGCACTATGTTCTGTGATGGAAAAGGCTTCTGCCTCACTGGATTTCTCACCAAGAACATCACATGCAAGCAAGAGGAGAAGACTATGCTTTATTGAAACATCCAATTCCACATGCAACCATGGGTCTTGTTTGTGCTGA 816 0.4289 MVYSFYDKTSSSSGSDISGLFNPTLHNLGACNDLSSSPHSLVFESDKGELVKCLAAAKVGKSEICEAKALAALKNHSEAERRRRERINGHLATLRGLVPSTEKMDKATLLAEVISQVKELKKNAAEVSKGFLIPKDADEVKVEPYNDHEGGEGSMSYSATICCDFRPEILSDLRQTLDSLPLHLVKAEISTLAGRMKNVFVFTCCKENINNIDFEKCQALASTVHQALCSVMEKASASLDFSPRTSHASKRRRLCFIETSNSTCNHGSCLC 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01277 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 125 IPR036638 GO:0046983
Gma02g01277 271 Gene3D - 68 129 IPR036638 GO:0046983
Gma02g01277 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Gma02g01277 271 PANTHER TRANSCRIPTION FACTOR BHLH30 3 264 IPR045847 GO:0003700|GO:0006355
Gma02g01277 271 CDD ACT_UUR-ACR-like 160 228 - -
Gma02g01277 271 Pfam Helix-loop-helix DNA-binding domain 75 120 IPR011598 GO:0046983
Gma02g01277 271 PANTHER DNA BINDING PROTEIN-LIKE 3 264 - -
Gma02g01277 271 SMART finulus 77 126 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01277 Gma-Chr2 14874514 14878838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01277 57 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 43.939 8.70e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g01277 HLH 6.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01277 - - gmx:100818879 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01995 07 41328645 41332447 Gma02g01277 02 14874514 14878838 GST