Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01256 ATGGCGGACGACTTCATCGTCTGTATTGACCGGATCATTGCCTCCACGCCCTGTTTTGGATCAGTGGATGGAAGACAATGTGATGGTGTTGGTGTTGACCCATTAATAATCCCCGTTCCTGAAAATGGTGGAGAAGGGTGCTCCTCCTCCTCCTCGTCTTCATCTTCAAACAAGGATGATGATGATGATGATGTTGTTGTTGTTGTTGTTGAGTGCAGAATATGCCAGGAAGAAGATCTAGCACAAGCCATGGAGGCTCCTTGTTCCTGTAATGGCACTCTCAAGTTTGCTCATAGGAAGTGTATCCAAAGATGGTGCAATAAGAAAGGAAATACAATATGTGAAATCTGTAATCAGGCATTTTCACCGAATTATTCTCTTCCACCGGTCAGAAGCAATGCAATTATGGCGATTGATATAAGGCAAGAATGGGGGCATGATGCTGATCTCCATGTGGCTCTAGCTTCAGCAGAGCAGCAGTTGCTGCAAACTGAGTATGAAGATTATGCCATGTCACAAACCAGTAGCATTGCTTGCCTTCGCTCTGTCACTCTCATTTTGTTGATGATTTTGCTTGTACGCCAAGCTTTAATTCTCACAAAGAACTCTGTAACTGGGCAAGATGCATCGATAATCTTTAATTTTGAGATGTCAGTCCTTCAATTTGTTGGTGTTCTTTTGCCATGCTTTGCAATGGCACGTTCCTGGTACGCCATACAGAACCAAAGGAGAAGACAGGGTTAA 744 0.4382 MADDFIVCIDRIIASTPCFGSVDGRQCDGVGVDPLIIPVPENGGEGCSSSSSSSSSNKDDDDDDVVVVVVECRICQEEDLAQAMEAPCSCNGTLKFAHRKCIQRWCNKKGNTICEICNQAFSPNYSLPPVRSNAIMAIDIRQEWGHDADLHVALASAEQQLLQTEYEDYAMSQTSSIACLRSVTLILLMILLVRQALILTKNSVTGQDASIIFNFEMSVLQFVGVLLPCFAMARSWYAIQNQRRRQG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01256 247 CDD RING_CH-C4HC3_MARCH 72 118 - -
Gma02g01256 247 SUPERFAMILY RING/U-box 70 121 - -
Gma02g01256 247 MobiDBLite consensus disorder prediction 40 62 - -
Gma02g01256 247 PANTHER OS01G0894600 PROTEIN 1 246 - -
Gma02g01256 247 Pfam RING-variant domain 72 117 IPR011016 GO:0008270
Gma02g01256 247 Pfam Protein of unknown function (DUF3675) 123 236 IPR022143 -
Gma02g01256 247 ProSiteProfiles Zinc finger RING-CH-type profile. 64 124 IPR011016 GO:0008270
Gma02g01256 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 128 IPR013083 -
Gma02g01256 247 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 246 IPR033275 -
Gma02g01256 247 SMART ringv_2 71 118 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01256 Gma-Chr2 14575883 14579124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01256 60 117 C3H Transcription Factor Family AT2G37950 42.623 1.68e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01256 - - gmx:100812120 461.455