Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01210 ATGTCCTCTTCCTCTTCCTCCTTCTTCCCCGCCCATATCACCACCGACCAAGAATTCTCCCTCATCGTTGCCGCCCTCACCAACGTCGTCTCCGGCTCTACCTCCAGCTCCTCCGTCCCTGAATTCCGCTTCCCGCACTCCTCCCCGCCTCTTTCTTCCGCCAGCCTTATGCCGCCACCCCCGCCTAGCATCCACACGTGTCGCGAGTGCAACATCGCAGGATGCCTGGGATGCAACTTTTTCCCCGAGGAACAAAGGAAGAAATACAGAGGAGTTAGGCAGAGGCCTTCGGGAAAGTGGGCCGCCGAGATTCGCGATCGTCATCGTTCGGCCCGGGTCTGGCTCGGTACATTCGAAACCGCCGAGGACGCCGCCCGGGCCTATGACAAGGCCTCGTTCGAGTTACGCGGCCCACGGGCCAAGCTCAATTTCCCCTTGGTCGACGAGTCGCTCACTCTCCAGCCGGAGATGGCTGCAACAGAAGAGCAGATTAACAACGAGGATAATCTCAATCAAGGCATGGGAATGGACTCGCACGAATTCTGGGACAGGATCAACGAAGCTGATTTTCATCCGTTCATGATGATGATGGATTTTACTGGAGATTCTTCAGACTCTGCTGCCACTGGTTAG 633 0.5687 MSSSSSSFFPAHITTDQEFSLIVAALTNVVSGSTSSSSVPEFRFPHSSPPLSSASLMPPPPPSIHTCRECNIAGCLGCNFFPEEQRKKYRGVRQRPSGKWAAEIRDRHRSARVWLGTFETAEDAARAYDKASFELRGPRAKLNFPLVDESLTLQPEMAATEEQINNEDNLNQGMGMDSHEFWDRINEADFHPFMMMMDFTGDSSDSAATG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01210 210 SUPERFAMILY DNA-binding domain 88 146 IPR016177 GO:0003677
Gma02g01210 210 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 206 - -
Gma02g01210 210 Gene3D AP2/ERF domain 87 147 IPR036955 GO:0003700|GO:0006355
Gma02g01210 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 7 206 - -
Gma02g01210 210 Pfam AP2 domain 88 137 IPR001471 GO:0003700|GO:0006355
Gma02g01210 210 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Gma02g01210 210 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Gma02g01210 210 ProSiteProfiles AP2/ERF domain profile. 88 145 IPR001471 GO:0003700|GO:0006355
Gma02g01210 210 SMART rav1_2 88 151 IPR001471 GO:0003700|GO:0006355
Gma02g01210 210 CDD AP2 87 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01210 Gma-Chr2 14100479 14101570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01210 12 161 AP2-EREBP Transcription Factor Family AT4G34410 40.625 6.71e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma02g01210 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01210 - - gmx:100794381 397.127