Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01131 ATGGGAAGATCTCCATGTTGTGATGAAATTGGTTTGAAGAAAGGCCCTTGGACACCTGAAGAAGATCAAAAGCTTATTGATCACATTCAGAAACATGGTCATGCAAGCTGGAGAGCTCTTCCAAAACTAGCAGGACTCAACAGGTGTGGCAAAAGTTGTAGGTTAAGGTGGACGAACTACTTGAGGCCCGACATTAAAAGAGGGAAGTTTTCCCAAGAAGAAGAACAAACAATTCTAGATCTCCATGCTATCCTAGGAAACAAATGGTCCGCAATAGCAAGTCACCTACCGGGTCGGACAGATAATGAAATCAAGAATTTTTGGAACACCCATCTCAAGAAGAAGCTTATTCAAATGGGTTATGATCCAATGACACACCAGCCTCGGATTGATGATATCTTCACAGGCTTGTCTCATCTCATAGCACTGGCTAACCTCAAAGAACTCTTGGACCAACCATTGGAACAAAACCTTGCAAGGCTTCAAGAATTGGCCAAGCTCCAATGCTTACAGCAACACCTCTTGCAGCCACAAGCTTCATTAAATATTGATGCAGATCCTAATTACACAATTAATAGCACAATAAACAGCACCTTCATGATGAACAAAGGCACCATCAATGTTTCAAATGATCAATTTGAGAACATTATTATGTCATCTAATTGTACCATGCCTTTCTCTGACATGCCTGAATTGAAAACACCACCTTCTTGTTCATATGAAGCACCATTAAGTAATAAGGACATGATTCAATTGTCTCAAGGAGAAATTTATCCCGATTCTCCATGGCTTCTTTCATGTTCAAGCACCACTCCTTCTTCTCCTTCTTCCCTTGTGGCTCCACCTGTGACGGAGGTTTCGTTGAGTACTAATGTGGAAGATAATTGCACTATTTGGCCTGAGCTCCTATTAGAGGACCCTTTGTTCAAAATGATTTCCTAG 942 0.4119 MGRSPCCDEIGLKKGPWTPEEDQKLIDHIQKHGHASWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILDLHAILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRIDDIFTGLSHLIALANLKELLDQPLEQNLARLQELAKLQCLQQHLLQPQASLNIDADPNYTINSTINSTFMMNKGTINVSNDQFENIIMSSNCTMPFSDMPELKTPPSCSYEAPLSNKDMIQLSQGEIYPDSPWLLSCSSTTPSSPSSLVAPPVTEVSLSTNVEDNCTIWPELLLEDPLFKMIS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01131 313 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma02g01131 313 CDD SANT 69 112 IPR001005 -
Gma02g01131 313 Gene3D - 11 67 - -
Gma02g01131 313 CDD SANT 16 61 IPR001005 -
Gma02g01131 313 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma02g01131 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma02g01131 313 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma02g01131 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 233 - -
Gma02g01131 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma02g01131 313 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma02g01131 313 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gma02g01131 313 SMART sant 13 63 IPR001005 -
Gma02g01131 313 SMART sant 66 114 IPR001005 -
Gma02g01131 313 Gene3D - 69 116 - -
Gma02g01131 313 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01131 Gma-Chr2 12424492 12426378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01131 1 312 MYB Transcription Factor Family AT5G10280 50.445 6.01e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma02g01131 Myb_DNA-binding 2.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01131 K09422 - gmx:100781670 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00653 01 11447101 11448468 Gma02g01131 02 12424492 12426378 GST