Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01123 ATGAGAGCGGGGAAAGGGAGTCAGGAAGAGGATGAGTACGAGGAAGAAGAGTTTGGTTCTTCCAAGAAACAGGGCACTTCCTCTGCCCCTAACACCAATAAAGCAGATGGAAAAGCCATCGATAAGGCTAGTGCGATAAGATCGAAACATTCTGTGACTGAGCAGCGGAGAAGGAGCAAGATAAATGAGAGATTCCAGATATTGAGGGATCTCATACCTCATAGTGATCAAAAGAGGGACACGGCATCATTTTTATTAGAGGTGATAGAGTATGTTCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGTTCATATCAAGGTTGGGGTCAAGAACCCTCGAAGTTGATGCCATGGAGAAATAGTCATTGGCGTGTCCAGAGCTTTGCCGGTCAACCCACGGCTGTAAAGAATGGTTTGGGTCCAGTATCACCTTTTCCTGGAAAGTTTGATGAAAGCAATGTTAGTATCTCTCCAACTATGCTTAATGGCTCCCAGAATACAATAGATCCTGATCAGAGCAGGGATATTGTCAACAAAACGGCTGAGAGGCAACCTGATTTAGTAAGCAAGGGAATACCTCTTCCCCTTGCTATGCATGCAAACATGTCTGTTCCTGTCAGAAGTGATGGCGTACTTGCACATCCTCTTCAGGGAACTGTTTCTAATGCACAATCAACTGAATGCCCAACAACTAGTGAACCACAGAATCAACAGGATGAACTCTCGGTTGAAGGAGGGACAATTAGCATCTCAAGTGCATACTCCCAAGGGTTGTTGAATAATCTAACTCAAGCGCTACAAAGTGCTGGTTTAGATCTGTCTCAGGCTAGCATATCAGTTCAGATTAATCTTGGGAAACGGGCAAACAAAGGACTGAATTGTGGGACCTCTTCTCTCAAGCATCATGACAACCCTTCTTCAAACAATCAAACAATTGCACATTTTAGAGATGCAGGCAGTGGAGAAGACTCTGATCAAGCACAAAAAAGAATGAAAACATATAAGTGA 1011 0.4352 MRAGKGSQEEDEYEEEEFGSSKKQGTSSAPNTNKADGKAIDKASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGQEPSKLMPWRNSHWRVQSFAGQPTAVKNGLGPVSPFPGKFDESNVSISPTMLNGSQNTIDPDQSRDIVNKTAERQPDLVSKGIPLPLAMHANMSVPVRSDGVLAHPLQGTVSNAQSTECPTTSEPQNQQDELSVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANKGLNCGTSSLKHHDNPSSNNQTIAHFRDAGSGEDSDQAQKRMKTYK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01123 336 MobiDBLite consensus disorder prediction 319 336 - -
Gma02g01123 336 Pfam Helix-loop-helix DNA-binding domain 47 96 IPR011598 GO:0046983
Gma02g01123 336 MobiDBLite consensus disorder prediction 296 316 - -
Gma02g01123 336 MobiDBLite consensus disorder prediction 296 336 - -
Gma02g01123 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 117 IPR036638 GO:0046983
Gma02g01123 336 SMART finulus 51 101 IPR011598 GO:0046983
Gma02g01123 336 MobiDBLite consensus disorder prediction 223 242 - -
Gma02g01123 336 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 334 IPR044295 GO:0003700|GO:0006351|GO:0046983
Gma02g01123 336 CDD bHLH_AtBIM_like 44 120 - -
Gma02g01123 336 PANTHER TRANSCRIPTION FACTOR BIM2 1 334 - -
Gma02g01123 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 95 IPR011598 GO:0046983
Gma02g01123 336 MobiDBLite consensus disorder prediction 1 58 - -
Gma02g01123 336 MobiDBLite consensus disorder prediction 40 58 - -
Gma02g01123 336 Gene3D - 43 116 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01123 Gma-Chr2 12302394 12307118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01123 1 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 55.357 1.76e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g01123 HLH 1.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01123 - - gmx:100816055 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01123 02 12302394 12307118 Gma02g01123 02 12302394 12307118 ECH
Gma01g00635 01 10822868 10828514 Gma02g01123 02 12302394 12307118 GST