Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01107 ATGGCTTCTTGTAGCAAGGTGGCTTCCAAGGTGGGGACTGAAGCAAAAAAACATGTTATTGACTGTTATGTTCCTTCGGAGAACATAGTTCTCAACTGCGGGTCCAACGTATCAAATGTTGTAGAATATGTTGATGGCAGGAATTGGAGTGGTGACATTGCATCACCCTATATGCCCTCCGATGCTGACACCAAGTTCCTGGTAGCCAGAGCCCCTAACACTCTTCAATCTATTCCTGAAGTTCCCTACATGACTGCTAGGATCTTTCAGTCTCAATTCACCTACACATTCAATGTAACCCCAGGTCCCAAATTCATTCGCCTTCACTTCTACCCAGCTTCCTACTTGAATCTCAACTTGTCCAATGCTTTCTTATCAGTAAGTGCTGCTAACTTCACTCTTCTCCATAACTTCAGTGTTTCCCTCAACGCTGATTACTTAAATGTAAACTATTTCATGAAAGAATTCATTGTCCATGTAAGTGGGAGAGTTTTAGAACTCACTTTCACCCCAACATATAATGCTTCTGATGCCTATGCATTTGTGAATGGGATTGAAGTTGTTTCAATGCCACTTGGTTTATACAGTCGTGGTGATGATGCTCCTCTTCCTTTAGTTGGTCACTATCCCGAGCTTGTGTACATCTATAATGATTCTGCCATGGAAAACATATGCAGATTGAAAGTAGGAGGCGAGCAAATTCCACCCAAATATGACACAGGCATGTTTCGCACTTGGGACACTGATGGTGCTTACATTTTAGGGAGTGATACTGGTATTGAACCCTTTAATATGAGCATGCCAGTTTTGTATGATGGTAATGCTCCACCATATTTAGCCCCGGCAGATGTCTACCGCACATCTCGTTCAATGCGTACTTTTGAAAAAGGCCTTGTCAATTTAAATTACAACATGACATGGTTTTTTCCCGTTGATTCAGCTGAAGAACAATTTGATCCAATTGCTTGGAGTGGGAGGCCAGGAGTTGCTATACAACGAGACTATGTCGTGATGGTTCCCAAAGTTAACGAGGCAAAGCAGGATTTGTGGCTTGATCTACACCCATACAAGGATTCTAAACCTATGATGTATTATAATTCTTTCTCGAATGGTGTGGAGATCTTTAAACTGAGCAATTTTGATGATAGGAATCTTGCAGGGCCCAACCCTTCTCAAAGCTTCGTGTCTGGATCAGATGTAAAGCCTCACCATGTTGCACAATTTAAGAAAAGTTCAGAGAAATTAAAATTCATCATAATTGGATGTGGACTTGGTACAGTGGTACTACCAATTCTCCTTTGCTTAGTTCTATTCAGGTTAAAGGTGATTAGACCTAGAAAGGTCATGTCATGGTGCGGTCTTGCTGTCCACACTCCTAATCAAATTGAAAAGGCAAAGAAGTCATCATTTTGCAGTCATTTCCCAATAAGAGAGATAAAAGTGGCAACAAATGACTTCGATGAGGCTCTACTTATAGGCACTGGTGGATTTGGAAGTGTTTACAAGGGTAGCTTTGATGGTGGGGCAACTTCTGTGGCCATAAAACGTGCCAATCCAATGTCACACCAAGGTGTTTCAGAATTCGAGACAGAGATCCTTTGGCTCTCACAGCTTAGGCATGCCAACCTAGTCTCACTTTTGGGTTACTGCAATGAAGATGGGGAGATGATATTGGTCTATGACTTCATGGACAATGGAACTCTATATGAACATCTTCATTTGAGGCAGAGAGATCAACCCCCTTTGTCTTGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTACACTACCTACACACTGGCACAAAGCACAGGATCATCCACCGTGACATAAAGACAACCAACATACTCTTAGATCATAATTGGGTGCCAAAAATTTCAGATTTTGGTTTGTCAAAGGCAGGTTACCCTTCCATACTCATCACCAATGTCAAGGGTAGTATTGGTTACCTAGATCCTGAGTGTTTTCAAAGCCACAAGTTGACTGAGAAATCTGATCTATACTCACTTGGGGTGGTGTTACTCGAGATTCTAAGCACAAGGCCTGCGGTAATTGTAGGTGAAGATGATGAGCATGTAAACTTGGCCGAATGGGCTATGTTGTGCTTTGAGAATGGCAACTTGGAGCAAATAGTTGACCCCAACTTGAAAGGAAACATAGTTGAAGAGTGCTTTGAGTTATATTTAGGATTTGCAATGAAATGTTTGGCTGAAAGAGGGGTGGAGAGGCCATCCATTGGTGAAGTGCTACAGAACCTTGTTTTAGCGATGCATCTTCAGAAAAAGGGTGGTGTTGTCCCCGATGGAAATGTTCAAAGAAATGATAATTCTGGTTTACAGGGTTATTCAGATTTGACACCTGGGGTCGAGTTCTCTGAAATCATGATGCCTGTTGGTCGGTGA 2412 0.4212 MASCSKVASKVGTEAKKHVIDCYVPSENIVLNCGSNVSNVVEYVDGRNWSGDIASPYMPSDADTKFLVARAPNTLQSIPEVPYMTARIFQSQFTYTFNVTPGPKFIRLHFYPASYLNLNLSNAFLSVSAANFTLLHNFSVSLNADYLNVNYFMKEFIVHVSGRVLELTFTPTYNASDAYAFVNGIEVVSMPLGLYSRGDDAPLPLVGHYPELVYIYNDSAMENICRLKVGGEQIPPKYDTGMFRTWDTDGAYILGSDTGIEPFNMSMPVLYDGNAPPYLAPADVYRTSRSMRTFEKGLVNLNYNMTWFFPVDSAEEQFDPIAWSGRPGVAIQRDYVVMVPKVNEAKQDLWLDLHPYKDSKPMMYYNSFSNGVEIFKLSNFDDRNLAGPNPSQSFVSGSDVKPHHVAQFKKSSEKLKFIIIGCGLGTVVLPILLCLVLFRLKVIRPRKVMSWCGLAVHTPNQIEKAKKSSFCSHFPIREIKVATNDFDEALLIGTGGFGSVYKGSFDGGATSVAIKRANPMSHQGVSEFETEILWLSQLRHANLVSLLGYCNEDGEMILVYDFMDNGTLYEHLHLRQRDQPPLSWIQRLEICIGVARGLHYLHTGTKHRIIHRDIKTTNILLDHNWVPKISDFGLSKAGYPSILITNVKGSIGYLDPECFQSHKLTEKSDLYSLGVVLLEILSTRPAVIVGEDDEHVNLAEWAMLCFENGNLEQIVDPNLKGNIVEECFELYLGFAMKCLAERGVERPSIGEVLQNLVLAMHLQKKGGVVPDGNVQRNDNSGLQGYSDLTPGVEFSEIMMPVGR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01107 803 Gene3D - 28 191 - -
Gma02g01107 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Gma02g01107 803 Pfam Malectin-like domain 31 304 IPR024788 -
Gma02g01107 803 ProSitePatterns Protein kinases ATP-binding region signature. 492 515 IPR017441 GO:0005524
Gma02g01107 803 CDD STKc_IRAK 492 756 - -
Gma02g01107 803 SUPERFAMILY Protein kinase-like (PK-like) 471 758 IPR011009 -
Gma02g01107 803 PANTHER OS07G0166700 PROTEIN 16 313 IPR045272 GO:0004714|GO:0006468
Gma02g01107 803 Pfam Protein kinase domain 491 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01107 803 ProSiteProfiles Protein kinase domain profile. 486 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01107 803 Gene3D Phosphorylase Kinase; domain 1 452 562 - -
Gma02g01107 803 PANTHER FERONIA RECEPTOR-LIKE KINASE 314 803 - -
Gma02g01107 803 PANTHER OS07G0166700 PROTEIN 314 803 IPR045272 GO:0004714|GO:0006468
Gma02g01107 803 Gene3D Transferase(Phosphotransferase) domain 1 563 768 - -
Gma02g01107 803 SMART serkin_6 486 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01107 803 PANTHER FERONIA RECEPTOR-LIKE KINASE 16 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01107 Gma-Chr2 12107829 12110727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01107 23 803 Receptor kinase-like Gene Family AT3G51550 45.085 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma02g01107 Malectin_like 2.9e-20 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01107 - - gmx:100776859 1581.62