Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma02g01096 | ATGCTCACCTCGAGGCAATCCTTGTACATCTCTCCCTCTTCTCCTTCTCCTTCTCCTTCTTCTTCATTGTTTTTTATTATTCTCCTCCAACTTACATTTCTCTATGGCCTTGCCTTCTCTGCAAACCATGAAGCCTCAACACTCTTCACATGGCTCCATAGTTCTTCTGCATCATCATCACCACCACCTTCTTTCTCCAACTGGAACCTCCTTGATCCCAATCCATGCAACTGGACATCCATAACATGCTCCTCACTAGGCCTTGTCACAGAAATCACCATACAATCCATCGCTCTAGAGCTTCCTATACCCTCCAACCTCTCTTCATTTCACTCTCTCCAAAAGCTTGTCATTTCTGATGCCAATCTCACTGGAACCATCCCTTCAGACATTGGTCACTGCTCTTCCCTCACTGTCATTGACCTCAGCTCCAACAACCTTGTTGGCTCCATCCCTCCAAGCATTGGCAAGCTCCAAAACCTTCAGAACTTGTCCTTGAACTCCAACCAGCTCACTGGAAAAATCCCTGTGGAGTTAAGCAACTGCATTGGCCTAAAAAATGTAGTACTTTTTGATAACCAGATAAGTGGGACTATTCCACCCGAGTTGGGAAAGTTGTCACAACTTGAGTCTCTAAGAGCAGGAGGGAACAAAGATATTGTAGGGAAGATTCCTCAAGAGATTGGAGAATGCAGCAATTTGACTGTGTTGGGGTTGGCAGATACCAGAATATCAGGTTCTTTGCCTGCTTCTTTGGGGAGACTTACAAGGCTTCAGACACTGTCCATCTATACTACTATGCTGTCGGGTGAGATTCCACCTGAGTTAGGTAACTGTTCTGAACTTGTTGACTTGTTCTTATATGAAAATAGCCTATCGGGGTCTATTCCATCTGAGCTTGGTAGGCTCAAGAAGCTGGAACAGTTGTTTTTGTGGCAGAATGGTCTTGTTGGGGCTATTCCAGAAGAGATTGGTAACTGTACAACCTTGAGAAAAATTGATTTCTCTTTGAATTCTCTATCTGGGACTATTCCTGTGTCTTTGGGGGGTCTCTTGGAGCTTGAAGAGTTTATGATTAGTGATAACAATGTGTCTGGTTCAATCCCTTCTAGTCTTTCAAATGCTAAAAATCTTCAGCAGTTGCAAGTTGACACAAACCAGCTCTCAGGGTTGATTCCACCAGAGCTTGGGCAGTTGTCAAGCCTCATGGTGTTCTTTGCATGGCAGAACCAGCTTGAGGGAAGCATTCCCTCCTCTTTGGGAAACTGTAGTAACCTCCAAGCGCTAGACTTGTCGCGCAACGCGCTCACCGGTAGTATTCCAGTTGGCCTATTCCAGCTTCAAAACCTCACAAAACTGCTTCTGATTGCCAATGACATATCTGGTTTCATACCAAATGAAATAGGCAGTTGCAGCTCTCTGATCAGGTTGAGGCTTGGAAACAACAGGATTACTGGTAGCATTCCCAAGACAATAAGAAGCCTCAAGAGCTTAAACTTTTTAGACCTCTCTGGGAACCGCCTCTCTGGGCCAGTGCCTGATGAGATTGGAAGCTGCACTGAACTGCAAATGATAGACTTCAGCAGCAACAACTTAGAAGGTCCTTTGCCTAATTCTTTGTCTTCACTATCATCTGTTCAGGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCTCTACCAGCGAGTTTAGGCCGTCTTGTTTCTCTGAGTAAGCTAATCCTCAGCAATAACTTGTTTTCTGGTCCTATTCCTGCATCATTGAGCCTATGTTCAAATCTCCAACTGCTTGATCTTAGTAGCAACAAGCTCAGTGGAAGCATACCAGCCGAGCTCGGCCGCATTGAGACTCTTGAAATTGCTCTTAATCTTAGTTGCAATTCACTCAGTGGAATAATCCCAGCTCAGATGTTTGCTCTTAACAAGCTTTCCATATTGGACATCTCACACAATCAGTTGGAAGGAGATTTGCAACCTCTTGCAGAGTTAGACAACCTTGTCTCCCTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTTCCAGATAACAAGCTTTTCAGGCAGTTGGCATCAAAAGACTTCACTGAAAATCAAGGGCTCTCGTGCTTTATGAAGGACTCTGGCAAGACTGGTGAGACATTGAATGGAAATGATGTAAGGAAGTCACGAAGGATTAAGCTAGCCATTGGATTGCTGATAGCCTTGACAGTAATAATGATTGCTATGGGGATAACTGCTGTGATCAAAGCAAGAAGAACCATTAGAGATGATGATTCAGAATTGGGTGACTCGTGGCCGTGGCAATTCATACCATTCCAGAAGCTAAACTTTTCAGTGGAACAAGTACTGAGATGTTTAACTGAAAGAAACATAATTGGGAAGGGGTGTTCTGGTGTTGTTTATAAAGCTGAAATGGATAATGGTGAAGTCATCGCTGTGAAGAAATTGTGGCCAACAACAATTGATGAAGGAGAGGCATTTAAGGAAGGAAAAAGTGGAATTCGTGACTCGTTTTCGACTGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGCTATTGGAACAGGAAAACAAGACTGCTTATTTTCGATTACATGCCGAATGGAAGTTTGAGTAGTCTACTACATGAGAGGACTGGAAACTCTCTGGAATGGGAACTTAGGTACAGAATCTTGTTAGGTGCTGCTGAAGGCCTTGCAtatctacatcatgactgtgtccctcctatagttcacagagatattaaagccaataacatcctcattggccttgaatttgagccttacattgctgactttggcttggctaaacttgtcgatgatggtgatttcggtcgttcttcaaatacagttgctgggtcctatggatatattgctccagAATATGGCTATATGATGAAGATCACTGAGAAGAGTGATGTTTATAGCTATGGCATAGTTCTATTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATACCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTTGAAGTGCTTGATCCTAGCCTACTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCATTGGGAATAGCCTTATTGTGTGTGAATTCTTCCCCTGATGAAAGACCAACGATGAGAGATATCGCTGCGATGCTCAAGGAGATAAAGCATGAAAGGGAGGACTATGCAAAATTTGATGTGCTTTTAAAAGGGTCTCCAGCAAATGGTGCATGTGGGAATAAAAGCATTGGTGGAGTTCTTCCAACATCTTCTTCATCAGTCCCAGTCATGCAAACTTTGAAAACAAAAAACGATAACTCAAGCTTCTCTGTGTCTTCACTGCTTCACTCATCTTCAAGTGTCATGATGGGTTCCAAATGA | 3420 | 0.4102 | MLTSRQSLYISPSSPSPSPSSSLFFIILLQLTFLYGLAFSANHEASTLFTWLHSSSASSSPPPSFSNWNLLDPNPCNWTSITCSSLGLVTEITIQSIALELPIPSNLSSFHSLQKLVISDANLTGTIPSDIGHCSSLTVIDLSSNNLVGSIPPSIGKLQNLQNLSLNSNQLTGKIPVELSNCIGLKNVVLFDNQISGTIPPELGKLSQLESLRAGGNKDIVGKIPQEIGECSNLTVLGLADTRISGSLPASLGRLTRLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSIPSELGRLKKLEQLFLWQNGLVGAIPEEIGNCTTLRKIDFSLNSLSGTIPVSLGGLLELEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSSLMVFFAWQNQLEGSIPSSLGNCSNLQALDLSRNALTGSIPVGLFQLQNLTKLLLIANDISGFIPNEIGSCSSLIRLRLGNNRITGSIPKTIRSLKSLNFLDLSGNRLSGPVPDEIGSCTELQMIDFSSNNLEGPLPNSLSSLSSVQVLDASSNKFSGPLPASLGRLVSLSKLILSNNLFSGPIPASLSLCSNLQLLDLSSNKLSGSIPAELGRIETLEIALNLSCNSLSGIIPAQMFALNKLSILDISHNQLEGDLQPLAELDNLVSLNVSYNKFSGCLPDNKLFRQLASKDFTENQGLSCFMKDSGKTGETLNGNDVRKSRRIKLAIGLLIALTVIMIAMGITAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRCLTERNIIGKGCSGVVYKAEMDNGEVIAVKKLWPTTIDEGEAFKEGKSGIRDSFSTEVKTLGSIRHKNIVRFLGCYWNRKTRLLIFDYMPNGSLSSLLHERTGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGIVLLEVLTGKQPIDPTIPDGLHVVDWVRQKKGLEVLDPSLLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREDYAKFDVLLKGSPANGACGNKSIGGVLPTSSSSVPVMQTLKTKNDNSSFSVSSLLHSSSSVMMGSK | 1139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma02g01096 | 1139 | Gene3D | Transferase(Phosphotransferase) domain 1 | 873 | 1083 | - | - | |
Gma02g01096 | 1139 | SUPERFAMILY | L domain-like | 386 | 721 | - | - | |
Gma02g01096 | 1139 | ProSiteProfiles | Protein kinase domain profile. | 786 | 1073 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g01096 | 1139 | Pfam | Protein kinase domain | 788 | 1062 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g01096 | 1139 | ProSiteProfiles | Leucine-rich repeat profile. | 642 | 664 | IPR001611 | GO:0005515 | |
Gma02g01096 | 1139 | PRINTS | Leucine-rich repeat signature | 594 | 607 | - | - | |
Gma02g01096 | 1139 | PRINTS | Leucine-rich repeat signature | 640 | 653 | - | - | |
Gma02g01096 | 1139 | SMART | serkin_6 | 786 | 1069 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g01096 | 1139 | Gene3D | Ribonuclease Inhibitor | 156 | 246 | IPR032675 | - | |
Gma02g01096 | 1139 | Gene3D | Ribonuclease Inhibitor | 343 | 438 | IPR032675 | - | |
Gma02g01096 | 1139 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 25 | 1132 | - | - | |
Gma02g01096 | 1139 | Gene3D | Ribonuclease Inhibitor | 536 | 620 | IPR032675 | - | |
Gma02g01096 | 1139 | Gene3D | Phosphorylase Kinase; domain 1 | 772 | 872 | - | - | |
Gma02g01096 | 1139 | Pfam | Leucine rich repeat N-terminal domain | 42 | 84 | IPR013210 | - | |
Gma02g01096 | 1139 | ProSitePatterns | Protein kinases ATP-binding region signature. | 792 | 815 | IPR017441 | GO:0005524 | |
Gma02g01096 | 1139 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE 2 | 25 | 1132 | - | - | |
Gma02g01096 | 1139 | SUPERFAMILY | RNI-like | 116 | 508 | - | - | |
Gma02g01096 | 1139 | Pfam | Leucine rich repeat | 470 | 508 | IPR001611 | GO:0005515 | |
Gma02g01096 | 1139 | Pfam | Leucine rich repeat | 112 | 171 | IPR001611 | GO:0005515 | |
Gma02g01096 | 1139 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 917 | 929 | IPR008271 | GO:0004672|GO:0006468 | |
Gma02g01096 | 1139 | Gene3D | Ribonuclease Inhibitor | 43 | 155 | IPR032675 | - | |
Gma02g01096 | 1139 | SMART | LRR_typ_2 | 567 | 591 | IPR003591 | - | |
Gma02g01096 | 1139 | SMART | LRR_typ_2 | 663 | 688 | IPR003591 | - | |
Gma02g01096 | 1139 | SMART | LRR_typ_2 | 495 | 519 | IPR003591 | - | |
Gma02g01096 | 1139 | SMART | LRR_typ_2 | 158 | 182 | IPR003591 | - | |
Gma02g01096 | 1139 | SMART | LRR_typ_2 | 303 | 327 | IPR003591 | - | |
Gma02g01096 | 1139 | SMART | LRR_typ_2 | 423 | 447 | IPR003591 | - | |
Gma02g01096 | 1139 | SMART | LRR_typ_2 | 592 | 615 | IPR003591 | - | |
Gma02g01096 | 1139 | Gene3D | Ribonuclease Inhibitor | 621 | 707 | IPR032675 | - | |
Gma02g01096 | 1139 | Gene3D | Ribonuclease Inhibitor | 439 | 535 | IPR032675 | - | |
Gma02g01096 | 1139 | Gene3D | Ribonuclease Inhibitor | 247 | 342 | IPR032675 | - | |
Gma02g01096 | 1139 | SUPERFAMILY | Protein kinase-like (PK-like) | 763 | 1066 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma02g01096 | Gma-Chr2 | 11915430 | 11919285 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma02g01096 | 38 | 1084 | Receptor kinase-like Gene Family | AT5G56040 | 48.493 | 0.0 | 969 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Gma02g01096 | Pkinase | 2.5e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma02g01096 | - | - | gmx:100818541 | 2080.83 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma01g00583 | 01 | 9039287 | 9043079 | Gma02g01096 | 02 | 11915430 | 11919285 | GST |