Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01096 ATGCTCACCTCGAGGCAATCCTTGTACATCTCTCCCTCTTCTCCTTCTCCTTCTCCTTCTTCTTCATTGTTTTTTATTATTCTCCTCCAACTTACATTTCTCTATGGCCTTGCCTTCTCTGCAAACCATGAAGCCTCAACACTCTTCACATGGCTCCATAGTTCTTCTGCATCATCATCACCACCACCTTCTTTCTCCAACTGGAACCTCCTTGATCCCAATCCATGCAACTGGACATCCATAACATGCTCCTCACTAGGCCTTGTCACAGAAATCACCATACAATCCATCGCTCTAGAGCTTCCTATACCCTCCAACCTCTCTTCATTTCACTCTCTCCAAAAGCTTGTCATTTCTGATGCCAATCTCACTGGAACCATCCCTTCAGACATTGGTCACTGCTCTTCCCTCACTGTCATTGACCTCAGCTCCAACAACCTTGTTGGCTCCATCCCTCCAAGCATTGGCAAGCTCCAAAACCTTCAGAACTTGTCCTTGAACTCCAACCAGCTCACTGGAAAAATCCCTGTGGAGTTAAGCAACTGCATTGGCCTAAAAAATGTAGTACTTTTTGATAACCAGATAAGTGGGACTATTCCACCCGAGTTGGGAAAGTTGTCACAACTTGAGTCTCTAAGAGCAGGAGGGAACAAAGATATTGTAGGGAAGATTCCTCAAGAGATTGGAGAATGCAGCAATTTGACTGTGTTGGGGTTGGCAGATACCAGAATATCAGGTTCTTTGCCTGCTTCTTTGGGGAGACTTACAAGGCTTCAGACACTGTCCATCTATACTACTATGCTGTCGGGTGAGATTCCACCTGAGTTAGGTAACTGTTCTGAACTTGTTGACTTGTTCTTATATGAAAATAGCCTATCGGGGTCTATTCCATCTGAGCTTGGTAGGCTCAAGAAGCTGGAACAGTTGTTTTTGTGGCAGAATGGTCTTGTTGGGGCTATTCCAGAAGAGATTGGTAACTGTACAACCTTGAGAAAAATTGATTTCTCTTTGAATTCTCTATCTGGGACTATTCCTGTGTCTTTGGGGGGTCTCTTGGAGCTTGAAGAGTTTATGATTAGTGATAACAATGTGTCTGGTTCAATCCCTTCTAGTCTTTCAAATGCTAAAAATCTTCAGCAGTTGCAAGTTGACACAAACCAGCTCTCAGGGTTGATTCCACCAGAGCTTGGGCAGTTGTCAAGCCTCATGGTGTTCTTTGCATGGCAGAACCAGCTTGAGGGAAGCATTCCCTCCTCTTTGGGAAACTGTAGTAACCTCCAAGCGCTAGACTTGTCGCGCAACGCGCTCACCGGTAGTATTCCAGTTGGCCTATTCCAGCTTCAAAACCTCACAAAACTGCTTCTGATTGCCAATGACATATCTGGTTTCATACCAAATGAAATAGGCAGTTGCAGCTCTCTGATCAGGTTGAGGCTTGGAAACAACAGGATTACTGGTAGCATTCCCAAGACAATAAGAAGCCTCAAGAGCTTAAACTTTTTAGACCTCTCTGGGAACCGCCTCTCTGGGCCAGTGCCTGATGAGATTGGAAGCTGCACTGAACTGCAAATGATAGACTTCAGCAGCAACAACTTAGAAGGTCCTTTGCCTAATTCTTTGTCTTCACTATCATCTGTTCAGGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCTCTACCAGCGAGTTTAGGCCGTCTTGTTTCTCTGAGTAAGCTAATCCTCAGCAATAACTTGTTTTCTGGTCCTATTCCTGCATCATTGAGCCTATGTTCAAATCTCCAACTGCTTGATCTTAGTAGCAACAAGCTCAGTGGAAGCATACCAGCCGAGCTCGGCCGCATTGAGACTCTTGAAATTGCTCTTAATCTTAGTTGCAATTCACTCAGTGGAATAATCCCAGCTCAGATGTTTGCTCTTAACAAGCTTTCCATATTGGACATCTCACACAATCAGTTGGAAGGAGATTTGCAACCTCTTGCAGAGTTAGACAACCTTGTCTCCCTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTTCCAGATAACAAGCTTTTCAGGCAGTTGGCATCAAAAGACTTCACTGAAAATCAAGGGCTCTCGTGCTTTATGAAGGACTCTGGCAAGACTGGTGAGACATTGAATGGAAATGATGTAAGGAAGTCACGAAGGATTAAGCTAGCCATTGGATTGCTGATAGCCTTGACAGTAATAATGATTGCTATGGGGATAACTGCTGTGATCAAAGCAAGAAGAACCATTAGAGATGATGATTCAGAATTGGGTGACTCGTGGCCGTGGCAATTCATACCATTCCAGAAGCTAAACTTTTCAGTGGAACAAGTACTGAGATGTTTAACTGAAAGAAACATAATTGGGAAGGGGTGTTCTGGTGTTGTTTATAAAGCTGAAATGGATAATGGTGAAGTCATCGCTGTGAAGAAATTGTGGCCAACAACAATTGATGAAGGAGAGGCATTTAAGGAAGGAAAAAGTGGAATTCGTGACTCGTTTTCGACTGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGCTATTGGAACAGGAAAACAAGACTGCTTATTTTCGATTACATGCCGAATGGAAGTTTGAGTAGTCTACTACATGAGAGGACTGGAAACTCTCTGGAATGGGAACTTAGGTACAGAATCTTGTTAGGTGCTGCTGAAGGCCTTGCAtatctacatcatgactgtgtccctcctatagttcacagagatattaaagccaataacatcctcattggccttgaatttgagccttacattgctgactttggcttggctaaacttgtcgatgatggtgatttcggtcgttcttcaaatacagttgctgggtcctatggatatattgctccagAATATGGCTATATGATGAAGATCACTGAGAAGAGTGATGTTTATAGCTATGGCATAGTTCTATTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATACCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTTGAAGTGCTTGATCCTAGCCTACTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCATTGGGAATAGCCTTATTGTGTGTGAATTCTTCCCCTGATGAAAGACCAACGATGAGAGATATCGCTGCGATGCTCAAGGAGATAAAGCATGAAAGGGAGGACTATGCAAAATTTGATGTGCTTTTAAAAGGGTCTCCAGCAAATGGTGCATGTGGGAATAAAAGCATTGGTGGAGTTCTTCCAACATCTTCTTCATCAGTCCCAGTCATGCAAACTTTGAAAACAAAAAACGATAACTCAAGCTTCTCTGTGTCTTCACTGCTTCACTCATCTTCAAGTGTCATGATGGGTTCCAAATGA 3420 0.4102 MLTSRQSLYISPSSPSPSPSSSLFFIILLQLTFLYGLAFSANHEASTLFTWLHSSSASSSPPPSFSNWNLLDPNPCNWTSITCSSLGLVTEITIQSIALELPIPSNLSSFHSLQKLVISDANLTGTIPSDIGHCSSLTVIDLSSNNLVGSIPPSIGKLQNLQNLSLNSNQLTGKIPVELSNCIGLKNVVLFDNQISGTIPPELGKLSQLESLRAGGNKDIVGKIPQEIGECSNLTVLGLADTRISGSLPASLGRLTRLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSIPSELGRLKKLEQLFLWQNGLVGAIPEEIGNCTTLRKIDFSLNSLSGTIPVSLGGLLELEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSSLMVFFAWQNQLEGSIPSSLGNCSNLQALDLSRNALTGSIPVGLFQLQNLTKLLLIANDISGFIPNEIGSCSSLIRLRLGNNRITGSIPKTIRSLKSLNFLDLSGNRLSGPVPDEIGSCTELQMIDFSSNNLEGPLPNSLSSLSSVQVLDASSNKFSGPLPASLGRLVSLSKLILSNNLFSGPIPASLSLCSNLQLLDLSSNKLSGSIPAELGRIETLEIALNLSCNSLSGIIPAQMFALNKLSILDISHNQLEGDLQPLAELDNLVSLNVSYNKFSGCLPDNKLFRQLASKDFTENQGLSCFMKDSGKTGETLNGNDVRKSRRIKLAIGLLIALTVIMIAMGITAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRCLTERNIIGKGCSGVVYKAEMDNGEVIAVKKLWPTTIDEGEAFKEGKSGIRDSFSTEVKTLGSIRHKNIVRFLGCYWNRKTRLLIFDYMPNGSLSSLLHERTGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGIVLLEVLTGKQPIDPTIPDGLHVVDWVRQKKGLEVLDPSLLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREDYAKFDVLLKGSPANGACGNKSIGGVLPTSSSSVPVMQTLKTKNDNSSFSVSSLLHSSSSVMMGSK 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01096 1139 Gene3D Transferase(Phosphotransferase) domain 1 873 1083 - -
Gma02g01096 1139 SUPERFAMILY L domain-like 386 721 - -
Gma02g01096 1139 ProSiteProfiles Protein kinase domain profile. 786 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01096 1139 Pfam Protein kinase domain 788 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01096 1139 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Gma02g01096 1139 PRINTS Leucine-rich repeat signature 594 607 - -
Gma02g01096 1139 PRINTS Leucine-rich repeat signature 640 653 - -
Gma02g01096 1139 SMART serkin_6 786 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01096 1139 Gene3D Ribonuclease Inhibitor 156 246 IPR032675 -
Gma02g01096 1139 Gene3D Ribonuclease Inhibitor 343 438 IPR032675 -
Gma02g01096 1139 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 25 1132 - -
Gma02g01096 1139 Gene3D Ribonuclease Inhibitor 536 620 IPR032675 -
Gma02g01096 1139 Gene3D Phosphorylase Kinase; domain 1 772 872 - -
Gma02g01096 1139 Pfam Leucine rich repeat N-terminal domain 42 84 IPR013210 -
Gma02g01096 1139 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Gma02g01096 1139 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 25 1132 - -
Gma02g01096 1139 SUPERFAMILY RNI-like 116 508 - -
Gma02g01096 1139 Pfam Leucine rich repeat 470 508 IPR001611 GO:0005515
Gma02g01096 1139 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Gma02g01096 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 917 929 IPR008271 GO:0004672|GO:0006468
Gma02g01096 1139 Gene3D Ribonuclease Inhibitor 43 155 IPR032675 -
Gma02g01096 1139 SMART LRR_typ_2 567 591 IPR003591 -
Gma02g01096 1139 SMART LRR_typ_2 663 688 IPR003591 -
Gma02g01096 1139 SMART LRR_typ_2 495 519 IPR003591 -
Gma02g01096 1139 SMART LRR_typ_2 158 182 IPR003591 -
Gma02g01096 1139 SMART LRR_typ_2 303 327 IPR003591 -
Gma02g01096 1139 SMART LRR_typ_2 423 447 IPR003591 -
Gma02g01096 1139 SMART LRR_typ_2 592 615 IPR003591 -
Gma02g01096 1139 Gene3D Ribonuclease Inhibitor 621 707 IPR032675 -
Gma02g01096 1139 Gene3D Ribonuclease Inhibitor 439 535 IPR032675 -
Gma02g01096 1139 Gene3D Ribonuclease Inhibitor 247 342 IPR032675 -
Gma02g01096 1139 SUPERFAMILY Protein kinase-like (PK-like) 763 1066 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01096 Gma-Chr2 11915430 11919285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01096 38 1084 Receptor kinase-like Gene Family AT5G56040 48.493 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma02g01096 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01096 - - gmx:100818541 2080.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00583 01 9039287 9043079 Gma02g01096 02 11915430 11919285 GST