Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01076 ATGGAGGATTATAAGAACAGGCATAGTTATCAGCAACAGCAACAGAAACAAGAAGAAGAAGAAGAAGAGAAAAAAGTAGTGTGTGAGAAGATGGAGAGGTACCCTAGGGATTTGCTTCAAGGATTTTCCTTGAGTGGTGTTACTACTGTTAGGGATGGTAATAATAATAACAACAACATTAACAATAAcatgatgcatcaacatcatcatcatcatgttcttcatcaccatcatgagcaacagcaacagcagcatgagGTGGATGATGAAGAGGTTGAGTTGAACCTTGGTCTTTCTCTCGGTGGAAGATTTGGGGTGGACAAGAACGCCAAAAAAAAGAAGCTTTTGCGTTCTTCTTCTGTGGTGGGGACAATGCCTCTTTTCCGGGAGGACGATGCGGTGGCGCCGTCGGCGGCGGCGTTCCCGGCGCTCATGAGGACTTCGTCTCTGCCGACGGAGACTGAGGAGGAGTGGCGGAGGCGGAAAGAGATGCAGACGCTGCGTCGGATGGAAGCGAAAAGACGCCGGTCGGAGAAGCAGAGGGGATCCCGGGAGGTCGCCGGCGCCGGCGAGGAGGTGGAGGCAGGGAGGAGTGTGGCAATGGGATTCAATAAGTTCGGTTCTTCGGCGGAGGCGGCGGTGCCGCCGCCGCCGGGGTGGGGTGTGCCAGGAAAGCAAGTTGTTCTTGGTGATGTGATGGGGAAGGGAAAGGGGTTTCAAGGATTGTTTGGGCAACCATCTTCTCACGGCTCAGCTGATTCTCAAGGAGGAAGCTCTTCATCACTTTCTGAAATGGATAGCAAGGCTTTTCTTGGATCAAGTAGCTGTGGTGAAGCAAAAAGCCCTATTAGTAATATATCAGCGCAAGAACAAAGCAGCCAGGATCCTGCGGGTTCAGGGGGAAAGACGAATGAGAATGTGACAAGAACTTCCAAAGCTGATCAGGGGGAGAATCCATCTAGGAAACACCATCCTTCCCAGAAAACAATGGGAAGACACATTGGGACAAACTCAATGGAAGACATGCCTTGTGTATTTACAAAAGGGGATGGTCCTAATGGAAGAAGAATTGAGGGTATTTTGTACAAATATGGTAAGGGGGAGGAAGTGAGGATCATGTGTGTGTGCCATGGAAACTTCCTCTCTCCGGCGGAGTTTGTTAAGCATGCTGGTGGCGGCGATGTTGCACACCCCCTTAGGCACATTGTTGTGAACCCTTCTGCTGCTCCCTTTTAG 1236 0.4757 MEDYKNRHSYQQQQQKQEEEEEEKKVVCEKMERYPRDLLQGFSLSGVTTVRDGNNNNNNINNNMMHQHHHHHVLHHHHEQQQQQHEVDDEEVELNLGLSLGGRFGVDKNAKKKKLLRSSSVVGTMPLFREDDAVAPSAAAFPALMRTSSLPTETEEEWRRRKEMQTLRRMEAKRRRSEKQRGSREVAGAGEEVEAGRSVAMGFNKFGSSAEAAVPPPPGWGVPGKQVVLGDVMGKGKGFQGLFGQPSSHGSADSQGGSSSSLSEMDSKAFLGSSSCGEAKSPISNISAQEQSSQDPAGSGGKTNENVTRTSKADQGENPSRKHHPSQKTMGRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAAPF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01076 411 PANTHER NINJA-FAMILY PROTEIN AFP1 31 409 - -
Gma02g01076 411 Pfam Putative nuclear localisation signal 144 267 IPR032310 -
Gma02g01076 411 Pfam Ethylene-responsive binding factor-associated repression 88 123 IPR012463 -
Gma02g01076 411 PANTHER AFP HOMOLOG 2 31 409 IPR031307 GO:0007165
Gma02g01076 411 MobiDBLite consensus disorder prediction 239 339 - -
Gma02g01076 411 MobiDBLite consensus disorder prediction 167 193 - -
Gma02g01076 411 MobiDBLite consensus disorder prediction 1 24 - -
Gma02g01076 411 Coils Coil 1 30 - -
Gma02g01076 411 Coils Coil 160 180 - -
Gma02g01076 411 MobiDBLite consensus disorder prediction 167 191 - -
Gma02g01076 411 MobiDBLite consensus disorder prediction 277 314 - -
Gma02g01076 411 Pfam Tify domain binding domain 370 404 IPR032308 -
Gma02g01076 411 MobiDBLite consensus disorder prediction 244 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01076 Gma-Chr2 11661438 11666508 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01076 - - gmx:100812680 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01076 02 11661438 11666508 Gma02g01076 02 11661438 11666508 ECH
Gma01g00556 01 8271729 8276791 Gma02g01076 02 11661438 11666508 GST