Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01061 ATGAACATGGTTTTTTCTCTGTCCATTGGCTCTTCTGCTGCATTGCCCCTCAGATGCACCTCCAAGCTCACTTCTTTCAGGGTTGCTTCTGCTGATGCCGATGGCTTCCCTTCATTTCTCCCCAGAGAACTTCACACCATTCAAGACCCTTTTGCCAGAAAATTCGCCTTGCGCATTCAGAGGCTACCCGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAACCACTGGTGCAGACCAAGGAAACCCCAGTTGTTCTTCTACATGGTTTTGACAGCTCATGTCTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTATTGAGACATGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGGAAAACTTCCTCCCTGTGATGTGGTATCCAAGCGTGATCACTTCTACCAGTTTTGGAAGTCTTACATTAGAAGGCCAATTATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCCGTTGACTTTGCGGTCAATTATCCAGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATTCTGAGGGAACTGGAAAGCTAGCAACCTTACCCAGAGCAGTAGCCTATGCCGGGGTTAATTTATTGAAGAGCCTTCCGTTACGCTTATATGCCACCTATTTGACCTTCACAAAAATTTCCTTCAGCACCAGCCTTGATTGGACTAATGTGGGCCGTTTGCATTGTTTCTTGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACAAGTGGTGGTTACAATGTTTCTCCATTGATAGGAAAGGTAAAACAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCAGTGCGACTCCACTGTGAATTACCTGATGCAATTATACGCCAAATACCAAATTGTGGACATCTTCCTCATCTGGAAAGACCAGATTCTACTATCAAACTAATTGTTGAATTTGTGCAAAGAGAGAGCAAGACATTAAGTCAATGTGTTGCACAAGTATGA 1035 0.4377 MNMVFSLSIGSSAALPLRCTSKLTSFRVASADADGFPSFLPRELHTIQDPFARKFALRIQRLPVPVRFSENPIMSSCVKPLVQTKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLGKLPPCDVVSKRDHFYQFWKSYIRRPIILVGPSLGSAVAVDFAVNYPEAVEKLVLIGASVYSEGTGKLATLPRAVAYAGVNLLKSLPLRLYATYLTFTKISFSTSLDWTNVGRLHCFLPWWDDATVDFMTSGGYNVSPLIGKVKQKTLIIWGENDRIISNKFAVRLHCELPDAIIRQIPNCGHLPHLERPDSTIKLIVEFVQRESKTLSQCVAQV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01061 344 PRINTS Alpha/beta hydrolase fold signature 113 128 IPR000073 -
Gma02g01061 344 PRINTS Alpha/beta hydrolase fold signature 158 171 IPR000073 -
Gma02g01061 344 PRINTS Alpha/beta hydrolase fold signature 172 185 IPR000073 -
Gma02g01061 344 PRINTS Alpha/beta hydrolase fold signature 276 290 IPR000073 -
Gma02g01061 344 SUPERFAMILY alpha/beta-Hydrolases 87 332 IPR029058 -
Gma02g01061 344 Gene3D alpha/beta hydrolase 80 338 IPR029058 -
Gma02g01061 344 Pfam Alpha/beta hydrolase family 89 322 IPR000073 -
Gma02g01061 344 PANTHER ALPHA/BETA FOLD HYDROLASE 1 344 - -
Gma02g01061 344 PRINTS Epoxide hydrolase signature 93 111 IPR000639 GO:0003824
Gma02g01061 344 PRINTS Epoxide hydrolase signature 113 128 IPR000639 GO:0003824
Gma02g01061 344 PRINTS Epoxide hydrolase signature 172 185 IPR000639 GO:0003824
Gma02g01061 344 PRINTS Epoxide hydrolase signature 307 329 IPR000639 GO:0003824
Gma02g01061 344 PANTHER HYDROLASE 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01061 Gma-Chr2 11530492 11536887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01061 88 330 Acyl Lipid Metabolism Gene Families AT3G10840 24.841 4.23e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01061 - - gmx:100800197 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01061 02 11530492 11536887 Gma02g01061 02 11530492 11536887 ECH
Gma01g00541 01 7815013 7821349 Gma02g01061 02 11530492 11536887 GST
Gma07g02184 07 44134976 44139373 Gma02g01061 02 11530492 11536887 PCT
Gma20g00239 20 2899777 2911745 Gma02g01061 02 11530492 11536887 PCT
Gma02g01061 02 11530492 11536887 Gma07g02184 07 44134976 44139373 PCT
Gma02g01061 02 11530492 11536887 Gma20g00239 20 2899777 2911745 PCT