Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01059 ATGGCGTCGCAAATGGCGATCCTCTTCCGCACGCGCACCCTCCTCTCCTCCAAACCCACCACCACCCTCATCAAAACCATTACCACATTCCCCTTCCTCTCACAAGAACCCCAATTAGTGGACCCCACCCCACCCCCCTCTTCCTCTTCAACCCCTCTCCCTCCCAACCCCGCCTCCGGCAGCCCCCTCTACCACGAAAACTGGCGCAGCCCAATCCCGCCACCACCCTCCTCCGCCGGCACCTCCCATGCGCTCTCCCCCGTGGGCTTCTACAACCGCGCCACCTCGGACACCTACGACCCCCGCGCCCTCCTCGACCTCTTCGGCGATTGGATGGCCTCGCAGCAGTGGCACGACGTCAAATTCCTCTTCGAGTCATGGGTCCGCTCCCTCGACAAGACCGGCAAACCTAACAAGCCCGATGTGAATCTCTTTAACCATTACCTACGCGCCAACCTCATGCTCGGCGCCTCCGCCGCGGAGCTCCTCGATCTCGTCGCGCAGATGGCGGAGTTCGACAACGTCGCCCCCAACACCGCCTCCTTCAACCTCGTCCTCAAGGCCATGTGCCAGGCCAAGGAAACCCTCGCCGCCGATAAATTGCTCCAACGGATGTTGCAGTCAGGAAATGATGCTCTCCCTGATGACGAATCGTATGACTTAGTCATTGGAATGCTCTTTTCCATGGGCCAGATTGACACTGCATTTAAATATATAGATTTAATTTTGAAATCTGGTAATGTGTTGTCAATGAAGGTTTTTATGAACTGTGTGGGGAGTTGTGTCAATAAGGGAAGGCTTGATACATTGGTGACAATAATTGAAAGGTGCAGGGCATCAGATCAAAACAAAGCTCTTTGCCCCAACTGGGACTTGTGCAATTTTATTGTTGAAATCGCAACTCGAGAGGATAATAGCAAATTAAGTTTTTATGGCCTGGAGTTTATGGCTAAATGGATTGTAAAGGGTGAACGTCAAAGACCCCCTATATATCTTTCTGTAGATGAAGGTTTAGTACTGTCAGCTCTTTTGACTGCTGGTAGAACCTATAATTCTGATCTGCTAGTGGCATCATGGGCTGTTTTGGACCGCTCATTGCGTAAAAAGAAAGTTCCTAATCCAGAGTCCTATCTTGGAAAGATATACGCGCTTGCGTCATTGGGGAATCTACAAAAGGCTTTTGGTACTCTAAATGAATATGAGGCAGCTTATGGAGACTCTGGTCAAGAAGCTGAAGACTTGTTCTGCCCATTTACTTCTTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACTCTAGATAATGTTTATTTTCAACTGGAGAATTTAAACCGTGCAGAACCTCCTTATAAATCTGTTGCTGCACTAAACTGTGTCATTTTAGGATGTGCAAACATATGGGACCTTGATCGTGCTTACCAAACTTTTGAATCAATTGGATCTACTTTTGGGTTGATCCCTGACATTCATTCATACAATGGGTTGATGTATGCCTTTGGGAAGCTGAAGAAGACACATGAAGCTACAAGGGTGTTTGAGCATCTAGTGAGTTTGGGTCTCAAGCCTAATGCAAAATCATATTCTCTTCTTGTTGATGCCCACCTCATTAACCGGGATGTCAAATCTGCTCTGGCAGTGATTGATGATATGAGAGCTGCTGGATATGAACCATCAAAAGAGGTGCTAAAAAAGGTCAGAAGGCGATGCATGCGAGAAATGGACAACGAAAGCGATGCCAGAGTGCAATCACTGGTTAATTCCTTGAATTACCGATTGGGTTCAGAAAACCGACGGGATATTCTGTTTAATCTTAATTACAGTAGTATGGGTTATGCTTGA 1848 0.4778 MASQMAILFRTRTLLSSKPTTTLIKTITTFPFLSQEPQLVDPTPPPSSSSTPLPPNPASGSPLYHENWRSPIPPPPSSAGTSHALSPVGFYNRATSDTYDPRALLDLFGDWMASQQWHDVKFLFESWVRSLDKTGKPNKPDVNLFNHYLRANLMLGASAAELLDLVAQMAEFDNVAPNTASFNLVLKAMCQAKETLAADKLLQRMLQSGNDALPDDESYDLVIGMLFSMGQIDTAFKYIDLILKSGNVLSMKVFMNCVGSCVNKGRLDTLVTIIERCRASDQNKALCPNWDLCNFIVEIATREDNSKLSFYGLEFMAKWIVKGERQRPPIYLSVDEGLVLSALLTAGRTYNSDLLVASWAVLDRSLRKKKVPNPESYLGKIYALASLGNLQKAFGTLNEYEAAYGDSGQEAEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLNRAEPPYKSVAALNCVILGCANIWDLDRAYQTFESIGSTFGLIPDIHSYNGLMYAFGKLKKTHEATRVFEHLVSLGLKPNAKSYSLLVDAHLINRDVKSALAVIDDMRAAGYEPSKEVLKKVRRRCMREMDNESDARVQSLVNSLNYRLGSENRRDILFNLNYSSMGYA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01059 615 MobiDBLite consensus disorder prediction 38 59 - -
Gma02g01059 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 526 560 IPR002885 -
Gma02g01059 615 MobiDBLite consensus disorder prediction 35 81 - -
Gma02g01059 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 178 212 IPR002885 -
Gma02g01059 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 491 525 IPR002885 -
Gma02g01059 615 PANTHER OS07G0599000 PROTEIN 1 611 IPR044605 -
Gma02g01059 615 TIGRFAM PPR: pentatricopeptide repeat domain 493 527 IPR002885 -
Gma02g01059 615 TIGRFAM PPR: pentatricopeptide repeat domain 181 209 IPR002885 -
Gma02g01059 615 TIGRFAM PPR: pentatricopeptide repeat domain 529 561 IPR002885 -
Gma02g01059 615 Pfam PPR repeat 181 209 IPR002885 -
Gma02g01059 615 Gene3D Tetratricopeptide repeat domain 113 323 IPR011990 GO:0005515
Gma02g01059 615 Gene3D Tetratricopeptide repeat domain 359 599 IPR011990 GO:0005515
Gma02g01059 615 Pfam PPR repeat family 490 536 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01059 Gma-Chr2 11515585 11521546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01059 359 561 Glycosyltransferase AT1G05670 22.439 9.62e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01059 - - gmx:100800731 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01059 02 11515585 11521546 Gma02g01059 02 11515585 11521546 ECH
Gma01g00539 01 7777685 7784036 Gma02g01059 02 11515585 11521546 GST