Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01053 ATGTTTGTTTACTTCAACAGGAGTTTGGGACAGTCATTTTCGAACTTAGTCGCTTTCAGCAAAGGCAAAGCAGATGGATACAAATTGATGGAGTTCATCAAACAGAAACCAACCATAGTGGAAGATTCATCTGAAGGAAAGTGCTTAGCTGAGATAGCAAGTTTTGATTCTTGGATGAGCTACAATGCTGATCATTTTGAAATGCCCAAGCAGACACTACAACTAAAATGGTTAGGCTATCAAATTGGATTGGTGAATCAAGAACCTGCACTCTTTGCAACTACTATTCTTGAGAATATACTCTATGGAAAACCTGTTGCAACAATGGCTGAAGTGGAAGCTGCTACTTCTGCTGCAAATGCTCATAGCTTTATCACCTTGCTTCCTAATGGCTATAACACTCAGTGGATTTTGTTGTTTGTTACCCTCTTGTCTTGCACGGATTTAGTAGTAGGTAACAAAACCAGTGTCATGGATTCTTCAAGAGGAATATCAGAATATCTGTACGAGAAACATAACAAAGAGAGGAAAACACACGAACCCAACATAGAACAAACAAAGCAGTTGAAGATGGAGCACGACGAAGACGAAGTGCCACCTCTTGCTGTTCAGATTCAAGGGAATGATGATTCCGTTTATCAGCGATCTTCTTCTGTTGGGGTCACTCTCATCACCGGTTATCTTGGTGCGGGCAAGTCCACTCTAGTGAATCATATTTTGAACACGCAGTATGGGAAGAGGATTGCTGTCATTTTGAATGAGTTTGGTGAGGAAAAAGGCGTGGAAAGAGCGATGATCAATGAAGGGGGTAAGGGTGCACTGGTTGAAGAATGGGTTGAGCTTGCCAATGGGTGTATATGTTGCACTGTCAAGCATAGTTTGGTTCAAGCACTTGAGCAGCTTGTTCAGAGAAAGGAAAGGCTTGACCATATATTGCTGGAAACCACTGGATTGGCAAATCCGGCTCCTTTGGCATCTGTTCTATGGTTGGATGAACAGTTGGAATCAGAAGTGAGGCTTGATTCTATTGTCACAGTGGTGGATGCTAAAAATTTGCGCTTCCAGCTTGAAGAGCATCGTGGGTCATCTTCATTTCCTGAAGCATATTTTCAGATAACATTTGCGCGTGCCACACATTTAGAGGCATTATTAGAAGAAAGTCGTTCTTTGTCTACCAAAAAGCTTCGTGATAGTGGCGTGAGAACCTTATGCATGTATGAGACACGGTCGATTGATCTTGATAAGATATATATAATGAGACCCATCAAATGA 1272 0.4167 MFVYFNRSLGQSFSNLVAFSKGKADGYKLMEFIKQKPTIVEDSSEGKCLAEIASFDSWMSYNADHFEMPKQTLQLKWLGYQIGLVNQEPALFATTILENILYGKPVATMAEVEAATSAANAHSFITLLPNGYNTQWILLFVTLLSCTDLVVGNKTSVMDSSRGISEYLYEKHNKERKTHEPNIEQTKQLKMEHDEDEVPPLAVQIQGNDDSVYQRSSSVGVTLITGYLGAGKSTLVNHILNTQYGKRIAVILNEFGEEKGVERAMINEGGKGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDEQLESEVRLDSIVTVVDAKNLRFQLEEHRGSSSFPEAYFQITFARATHLEALLEESRSLSTKKLRDSGVRTLCMYETRSIDLDKIYIMRPIK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01053 423 PANTHER COBW DOMAIN-CONTAINING PROTEIN 1-RELATED 212 375 - -
Gma02g01053 423 PANTHER COBW-RELATED 212 375 - -
Gma02g01053 423 Pfam CobW/HypB/UreG, nucleotide-binding domain 221 375 IPR003495 -
Gma02g01053 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 360 IPR027417 -
Gma02g01053 423 Gene3D - 71 135 IPR027417 -
Gma02g01053 423 Gene3D - 217 416 IPR027417 -
Gma02g01053 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 135 IPR027417 -
Gma02g01053 423 CDD CobW-like 221 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01053 Gma-Chr2 11471703 11475676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01053 71 135 Calmodulin-binding Proteins AT2G36910 63.077 3.42e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01053 - - gmx:100808384 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00533 01 7701065 7705964 Gma02g01053 02 11471703 11475676 GST