Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01047 ATGGATTTGAAAGTAACTCTATGTTATGTTGTTCTTTTATTATTATTTTCCCTGTCTTCAGCAGAAGATGTTAAACTCGAAGTGAAAGGGGTGGCAAGCATCGCTAACACAGATGATAATTTTATCTGCGCAACATTGGACTGGTGGCCTGCTAATAAGTGTGACTATGACCAGTGTCCATGGGGACAAGCAGGCATTCTCAATCTGGACTTGGATAACAAAATTCTAACAAATGCTGTCAAGGCATTTAATCCCCTGAGGATCAGATTAGGTGGCTCACTGGAAGATCAGATTGTTTACCAATTTGGGAAGCAAAAGAAATGCCCACATTTCAAAAAGAAGGCTGATGGTCTTTTTGGTTTCAGCCAAGCCTGCCTTCCCAAAGTGAGATGGGATGAAGTAAATGACTTCTTTAACAAAACTGGAGTGAAATTAATTTTTGGGTTGAATGCTCTCACTGGGAAGAGAAATTCTGCAGAGGACAAGAAGAACTGGGTTGGAAATTGGAATCCAAAAAATGCAATAAGTCTCATGAAGTACACAATATCAAAAGGATACAAAATAGATTCATATGAATTGGGAAATGAGCTATGTGCTGAGGGGATATCAGCCAGAGTAGACAGTGTTGAATATGCTAAAGACATCACTAGGCTCAGACATATAGTTAATCTACTGTACCCAATTGCTTCTACAAGGCCTAAAGTGCTAGGACCTGGTGGTTTCTATGGTAAGGAATGGTTTTCTAGCTTCTTAATGAATGTTGGGCCTGGTGTGGTTGATGGAATCACTCACCACATTTACAACCTTGGTGCTGGTATGAGTGTTGACAAGGATCTCATCAATAGGGTTCAAGACCCATATTTATTGAGCCAAGTTGCTGAAACTTACAAAAGTGTAGCTCAAGCAGTCAAGGAATTCACACCATGGGCTGGACCATGGGTTGGGGAATCTGGTGGAGCCTATAACAGTGGTGGCAAAGATGTGTCAAATACTTTTGTTAATGGCTTTTGGTACTTGGATCAGCTGGGCATGACATCAACCTTAAACCACAAGGTTTATTGTAGACAAAGTCTAATCGGAGGAAACTATGGTTTGCTAAACACCACAACCTTTATTCCTAACCCGGATTATTATGGAGCTCTTCTGTGGCATCGACTTATGGGAAGCAAAGTGCTTTCTGTTTCTCACGAAGGATCTCCATTTCTGCGTACATATGCTCATTGTTCAAAGAAAGGGCCTGGTATCACTGTGCTACTCATAAACATGTCCAATTCCACAACTTTCAATGTGTTCCTCATCAATGACATGAATCTGTACCCGGTCCTGAACACAGTACGAAGTGTACCAATGAAGATGAGGGAAGAATACCATTTGACACCAAGAGATGGTAACATTCAAAGTGATGTGGTGATGTTGAATGGAACTCCATTGGTGCTGACCAAGTCACTAGACATTGCAGAAATGAAACCAAAGCTGGTTGATCCATCTTCTTCAATCAAAGCAGGGCCTGATTCCATAGTATTTGTACAAATCAAGAGCTTCAATGCACCAGCATGCGCATAA 1563 0.4107 MDLKVTLCYVVLLLLFSLSSAEDVKLEVKGVASIANTDDNFICATLDWWPANKCDYDQCPWGQAGILNLDLDNKILTNAVKAFNPLRIRLGGSLEDQIVYQFGKQKKCPHFKKKADGLFGFSQACLPKVRWDEVNDFFNKTGVKLIFGLNALTGKRNSAEDKKNWVGNWNPKNAISLMKYTISKGYKIDSYELGNELCAEGISARVDSVEYAKDITRLRHIVNLLYPIASTRPKVLGPGGFYGKEWFSSFLMNVGPGVVDGITHHIYNLGAGMSVDKDLINRVQDPYLLSQVAETYKSVAQAVKEFTPWAGPWVGESGGAYNSGGKDVSNTFVNGFWYLDQLGMTSTLNHKVYCRQSLIGGNYGLLNTTTFIPNPDYYGALLWHRLMGSKVLSVSHEGSPFLRTYAHCSKKGPGITVLLINMSNSTTFNVFLINDMNLYPVLNTVRSVPMKMREEYHLTPRDGNIQSDVVMLNGTPLVLTKSLDIAEMKPKLVDPSSSIKAGPDSIVFVQIKSFNAPACA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01047 520 Pfam Glycosyl hydrolase family 79, N-terminal domain 24 343 IPR005199 GO:0016020|GO:0016798
Gma02g01047 520 PANTHER OS07G0598400 PROTEIN 12 520 - -
Gma02g01047 520 SUPERFAMILY (Trans)glycosidases 37 387 IPR017853 -
Gma02g01047 520 Gene3D Glycosidases 63 385 - -
Gma02g01047 520 PANTHER HEPARANASE-RELATED 12 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01047 Gma-Chr2 11331406 11334348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01047 1 520 Glycoside Hydrolase AT5G61250 49.171 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01047 K07964 - gmx:100803057 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01047 02 11331406 11334348 Gma02g01047 02 11331406 11334348 ECH
Gma01g00517 01 7356412 7358639 Gma02g01047 02 11331406 11334348 GST
Gma18g01276 18 21878304 21881459 Gma02g01047 02 11331406 11334348 PCT