Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01042 ATGGAGATGGAAGTAGACATCGAGAAGAAGCAACAAGACGTGGTGAAAGAGAAAGACTTGTTCAAAGCTGCAGAAGAGGGCGAGGCATCAACGTTCGAAGCTCTCTCTTCTGAAATCCTCTCCAAAGCCCTCTCTCTCAGAAACGAAGACGCTCGTTCCCTTCTCCACGTCGCAGCTTCTTCCGGTCACTCCCAGGTAGTGAAGATAGTGTTGTCTTGTGATGCATCTGCTGGTGTGGTGAATTGTGCTGATGAGGAAGGGTGGGCGCCGCTTCACTCTGCAGCCAGCATTGGGAGTGTGGAGATAGTGGAGACTCTATTGAGCAAAGGAGCTGATGTTAATCTGAAAAATAATGGGGGTCGTGCTGCTCTACACTATGCGGCCAGCAAAGGTTGGGTGAAGATTGCTGAAATGCTCATCTCCCATGATGCCAAGATTAATATAAAGGATAAGGTTGGTTGCACTCCATTGCATCGGGCAGCTAGCACTGGGAAATCTGAGCTGTGTGAACTTTTGATTGAAGAAGGAGCAGAGGTTGATGCTGTTGATAGAGCTGGTCAAACTCCTCTAATGAATGCTGTGATTTGCTATAACAAAGAGGTAGCCCTTCTTCTGATAAGACATGGAGCAGATGTGGATGTGGAGGACAAGGAAGGGTACACGGTGCTTGGTCGAGCCACGCATGAGTTTAGACCAATATTAATTGATGCTGCCAAGGCCATGCTTGAGTGA 732 0.4809 MEMEVDIEKKQQDVVKEKDLFKAAEEGEASTFEALSSEILSKALSLRNEDARSLLHVAASSGHSQVVKIVLSCDASAGVVNCADEEGWAPLHSAASIGSVEIVETLLSKGADVNLKNNGGRAALHYAASKGWVKIAEMLISHDAKINIKDKVGCTPLHRAASTGKSELCELLIEEGAEVDAVDRAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRATHEFRPILIDAAKAMLE 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01042 243 ProSiteProfiles Ankyrin repeat profile. 152 184 IPR002110 GO:0005515
Gma02g01042 243 PANTHER MYOTROPHIN 15 157 - -
Gma02g01042 243 PANTHER MYOTROPHIN 78 227 - -
Gma02g01042 243 Gene3D - 12 122 IPR036770 -
Gma02g01042 243 ProSiteProfiles Ankyrin repeat region circular profile. 119 151 - -
Gma02g01042 243 Pfam Ankyrin repeats (3 copies) 153 216 IPR002110 GO:0005515
Gma02g01042 243 Pfam Ankyrin repeats (3 copies) 21 117 IPR002110 GO:0005515
Gma02g01042 243 Gene3D - 123 157 IPR036770 -
Gma02g01042 243 Gene3D - 158 242 IPR036770 -
Gma02g01042 243 ProSiteProfiles Ankyrin repeat profile. 50 82 IPR002110 GO:0005515
Gma02g01042 243 PANTHER MYOTROPHIN 15 157 - -
Gma02g01042 243 PANTHER MYOTROPHIN 78 227 - -
Gma02g01042 243 Pfam Ankyrin repeat 120 148 IPR002110 GO:0005515
Gma02g01042 243 ProSiteProfiles Ankyrin repeat profile. 86 118 IPR002110 GO:0005515
Gma02g01042 243 PRINTS Ankyrin repeat signature 51 66 IPR002110 GO:0005515
Gma02g01042 243 PRINTS Ankyrin repeat signature 102 116 IPR002110 GO:0005515
Gma02g01042 243 ProSiteProfiles Ankyrin repeat profile. 119 151 IPR002110 GO:0005515
Gma02g01042 243 SMART ANK_2a 86 115 IPR002110 GO:0005515
Gma02g01042 243 SMART ANK_2a 185 214 IPR002110 GO:0005515
Gma02g01042 243 SMART ANK_2a 50 82 IPR002110 GO:0005515
Gma02g01042 243 SMART ANK_2a 152 181 IPR002110 GO:0005515
Gma02g01042 243 SMART ANK_2a 119 148 IPR002110 GO:0005515
Gma02g01042 243 ProSiteProfiles Ankyrin repeat region circular profile. 152 184 - -
Gma02g01042 243 ProSiteProfiles Ankyrin repeat region circular profile. 86 118 - -
Gma02g01042 243 SUPERFAMILY Ankyrin repeat 10 227 IPR036770 -
Gma02g01042 243 ProSiteProfiles Ankyrin repeat region circular profile. 185 217 - -
Gma02g01042 243 ProSiteProfiles Ankyrin repeat profile. 185 217 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01042 Gma-Chr2 11302835 11306612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01042 23 209 Miscellaneous Gene Families AT1G07710 36.598 6.06e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01042 K06694 - gmx:100795610 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01042 02 11302835 11306612 Gma02g01042 02 11302835 11306612 ECH
Gma01g00511 01 7288224 7291535 Gma02g01042 02 11302835 11306612 GST