Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01022 ATGGAAGAGACAGAGGACTCAACCAATGCCAACCAGAAATTCACCACCAAAAGAAGGAGCTTCAGGAATGGAGGCAACTCTCATGAGCATCATCATTATCACCATCACCACCACCACCACCACCATCATCATCACTATCAGCACCATCACCATCATCATCAGCTGCTACAATACTCAACTCAGCTTGGCTTTTGCAACAACCAGAACAAGTATCAGAGATACTACCCAGCTCTTCTTCCTCTACCTTCTCTTATACCTCTTCAACAACTTCCTTTGACTCCACCCTTCCCTCCGAACCTCACCATCAAATCAAAAACCCATTTGCGCAAACCTCCATGCATGCTCAATAGCTCCCCGTCCTCAGATTACAAGCTCTCTCAGCCACCACTTGATCCTGCTCCGAAGGAACTTCAGCAGCAAACTAAGGCATCCTTAAAAGGAGATGATGGGAAGAAACTCATTCCAGCAAGGAAGCCACAGGCAGTAATTGTTGCAAGGAGGCCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTTCTTGCCAACCACTTTTTGGTGCAATTTGATCCATCACAGAAGATATATCATTACAATGTTGAAATCACTCCTCATCCCTCCAAGGATGTTGCCAGAGCAATCAAGCAGAAGTTGGTAAATAACAATTCTGCGGTCCTCTGTGGTGCTACTCCAGCATATGATGGTAGAAAGAATCTTTATAGTCCAGTTGAATTCCAAAATGACAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAGCAAGCTGACTTCACCTTATGGAGAAATGTCTGACTTGAAAGAGAAGCATGAACAGCTTAAACTTTTCAGGATAAATATCAAACTGGTCTCGAAGATCAATGGGAAGGAGTTGAGTAACTATTTGAGCAAAGAGGATGATGATTGGATTCCACTTCCACAGGATTATCTGCATGCTTTGGATGTAGTTCTTAGGGAAAGTCCAACCGAGAAATGCATACCTGTAGGGAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAAGACATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAACGTGGATTTCTCAGTAACTGCTTTCCATGAGAGCATAGGAGTGATTGCATACTTGCAGAAGCGCCTCGAGTTTCTTCGAGACCTGTCTCAAAGAAAGACAGCTCAATTAACCGGTGAAGAGAGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTCGTTTGCCATAGAGAAACTGTTCAACGATATCGTGTCTATGGCTTGACTGAGGAGGTTACTGAAAATCTTTGGTTTGCTGACAGAGATGGGAAGAATCTGAGGTTGGTGAATTACTTTAAAGATCAGTATAACTATGACATACAATTCAGAAAACTGCCATGCTTGCAAATTAGTAGGAGTAAGCCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAGAAGTTCCTTGGGAAACTGTCTGATGATCAAACAGCAAGAATACTCAAAATGGGCTGCCAAAGACCGGGAGAACGAAAAACCATTGTCGAAGGAGTCATGAGAGGAACTGTTGGGCCTACCAGTGGTGATCAGGAAAAAGAATTCAAACTCCAAGTATCAAGAGAAATGACAAAGTTGACTGGTAGAATTCTTCACCCTCCCAAACTAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTGACTCCTTCACGTCACGACCGCCAGTGGAACCTTCTTGATGGACATGTCTTCGAAGGAACTACAATTGAAAGGTGGGCACTAATTAGTTTTGGGGGCACACCTGACCAGAAGTCCAATGTCCCCAGATTCATAAACCAGTTATGTCAAAGGTGTGAACAATTGGGCATTTTTCTTAACAAGAACACAGTTATTAGTCCCCAGTTTGAATCAATCCAAATTCTTAACAATGTCACCCTTTTGGAATCTAAGCTCAAGAGGATCCTGAGGACAGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGAATTGCTGAGACAAGTGTTGGTGTTGTGAGCCAATGCTGCCTGTACCCCAATCTCAACAAGTTGAGTTCACAATTTTTGGCCAATTTGGCCCTCAAAATCAACGCCAAAGTTGGTGGATGCACAGTTGCCTTGTACAACTCATTGCCATCGCAGTTACCGCGCCTCTTTCATATTGACGAGCCGGTGATATTCATGGGTGCAGATGTGACACATCCTCACCCTCTAGATGATGTCAGTCCATCTGTCGCTGCTGTCGTCGGCAGCATGAATTGGCCAACAGCAAACAAGTACATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATCATCCTGGACCTAGGCGCAATGGTGGGGGAGTTGCTTGATGATTTTTACCAGGAGGTAGAGAAACTCCCTAACAGAATCATTTTCTTCCGAGACGGGGTCAGTGAAACTCAGTTTTACAAAGTGCTGGAAGAGGAACTTCAATCCATCAGGTGTGCATGCTCAAGGTTTCCTGGCTACAAACCTACCATTACTTTTGCAGTTGTGCAAAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGACCAGTCTTCAACTCAAAAAAACAATTTTCTATATGAAAACATTCCTCCAGGGACTGTGGTTGATTCTGTGATCACTCATCCAAAGGAGTTTGATTTCTATCTTTGTAGCCATTGGGGTGTTAAAGGAACAAGTAGGCCAACTCACTACCATGTCTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTTCAGAAACTGGTTTACAACTTGTGCTACACTTTTGTTAGGTGTACCAAGCCAATTTCTTTGGTGCCTCCTGCATATTATGCACATTTGGCTGCATATAGAGGCAGACTCTACCTTGAGAGATCAGAGTCCTTAGGTTTATTCAGAAGCACATCTACACTATCCAGAGCTGCTCCTCCAAAGACAGCACCTCTACCTAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTATTGCTAG 3096 0.4364 MEETEDSTNANQKFTTKRRSFRNGGNSHEHHHYHHHHHHHHHHHHYQHHHHHHQLLQYSTQLGFCNNQNKYQRYYPALLPLPSLIPLQQLPLTPPFPPNLTIKSKTHLRKPPCMLNSSPSSDYKLSQPPLDPAPKELQQQTKASLKGDDGKKLIPARKPQAVIVARRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDVARAIKQKLVNNNSAVLCGATPAYDGRKNLYSPVEFQNDKLEFYISLPIPTSKLTSPYGEMSDLKEKHEQLKLFRINIKLVSKINGKELSNYLSKEDDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIAYLQKRLEFLRDLSQRKTAQLTGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEVTENLWFADRDGKNLRLVNYFKDQYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIVEGVMRGTVGPTSGDQEKEFKLQVSREMTKLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTTIERWALISFGGTPDQKSNVPRFINQLCQRCEQLGIFLNKNTVISPQFESIQILNNVTLLESKLKRILRTASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYPNLNKLSSQFLANLALKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDVSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIILDLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLEEELQSIRCACSRFPGYKPTITFAVVQKRHHTRLFPFETDQSSTQKNNFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTAPLPKLSENIKKLMFYC 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01022 1031 MobiDBLite consensus disorder prediction 28 54 - -
Gma02g01022 1031 MobiDBLite consensus disorder prediction 101 152 - -
Gma02g01022 1031 Pfam PAZ domain 396 518 IPR003100 GO:0005515
Gma02g01022 1031 Pfam N-terminal domain of argonaute 178 324 IPR032474 -
Gma02g01022 1031 Gene3D paz domain 379 506 - -
Gma02g01022 1031 PANTHER PROTEIN ARGONAUTE 7 118 1030 - -
Gma02g01022 1031 CDD PAZ_argonaute_like 396 501 - -
Gma02g01022 1031 ProSiteProfiles PAZ domain profile. 393 502 IPR003100 GO:0005515
Gma02g01022 1031 MobiDBLite consensus disorder prediction 111 125 - -
Gma02g01022 1031 ProSiteProfiles Piwi domain profile. 681 992 IPR003165 GO:0003676
Gma02g01022 1031 Gene3D - 567 743 - -
Gma02g01022 1031 Pfam Argonaute linker 1 domain 334 383 IPR014811 -
Gma02g01022 1031 SUPERFAMILY Ribonuclease H-like 673 992 IPR012337 -
Gma02g01022 1031 SMART Piwi_a_2 681 992 IPR003165 GO:0003676
Gma02g01022 1031 CDD Piwi_ago-like 550 991 IPR045246 -
Gma02g01022 1031 Gene3D - 753 1031 IPR036397 GO:0003676
Gma02g01022 1031 MobiDBLite consensus disorder prediction 1 54 - -
Gma02g01022 1031 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 118 1030 - -
Gma02g01022 1031 SMART PAZ_2_a_3 393 524 IPR003100 GO:0005515
Gma02g01022 1031 SMART DUF1785_2 333 385 IPR014811 -
Gma02g01022 1031 Pfam Piwi domain 682 989 IPR003165 GO:0003676
Gma02g01022 1031 SUPERFAMILY PAZ domain 380 538 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01022 Gma-Chr2 11024009 11028833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01022 117 1031 Eukaryotic Initiation Factors Gene Family AT1G48410 40.432 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01022 K11593 - gmx:100797755 1995.7