Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01004 ATGGAGAACAGAACAAGCTCTGTACTCCCACCTGGCTTCAGGTTTCATCCCACTGATGAAGAACTAATTGTTTACTATCTTTGCAACCAAGCCACATCAAGACCATGCCCTGCATCAATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGAAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGAGGAAGTATCCAAATGGGGTGAGGCCTAATAGAGCAACCGTGTCTGGGTATTGGAAGGCCACTGGCACAGATAAAGCAATCTATAGTGGGTCTAAGCATGTAGGGGTGAAGAAGGCTTTGGTTTTTTATAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATTATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAATAGACAAGTTGGATCCATGAGGCTAGACGACTGGGTCTTGTGTAGGATCTACAAGAAGAAGAACATTGGAAAGTCAATGGAGGCAAAAGAGGAATACCCAATAGCCCAAATCAATCTTACACCAGCAAACAATGACAGTGAACAAGAAATGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGAAATGGATTACTTGGGTCCAATATCACATATATTATCTGATGCCACATACAATTCAACCTTTGATTTTCAAATTAACACTGCCAATGGTGGAATAGACCCGTTCGTAAAACCACAGCCGGTTGAAATCCCTTATGCAGCAGATTCAGGGAAGTACCAAGTGAAACAAAATAGCACCATCAACCCCACCATATTTGTGAACCAAGTGTATTATCAAAGAGGATAA 840 0.4143 MENRTSSVLPPGFRFHPTDEELIVYYLCNQATSRPCPASIIPEVDIYKFDPWELPEKTDFGEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQVGSMRLDDWVLCRIYKKKNIGKSMEAKEEYPIAQINLTPANNDSEQEMVKFPRTSSLTHLLEMDYLGPISHILSDATYNSTFDFQINTANGGIDPFVKPQPVEIPYAADSGKYQVKQNSTINPTIFVNQVYYQRG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01004 279 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Gma02g01004 279 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Gma02g01004 279 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Gma02g01004 279 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Gma02g01004 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 3 234 - -
Gma02g01004 279 PANTHER NAC TRANSCRIPTION FACTOR 56 3 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01004 Gma-Chr2 10763351 10764712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01004 1 216 NAC Transcription Factor Family AT1G69490 67.982 1.73e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g01004 NAM 3.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01004 - - gmx:100170717 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01004 02 10763351 10764712 Gma02g01004 02 10763351 10764712 ECH