Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00998 ATGGCTCAAATTTGTTTGCTCTTGGTGGGGCTTCTCTCAATGTTCTCCTCTGCCTATGGCTACGGATATGGTGGTGGCTGGGTTAATGCACATGCCACCTTCTATGGAGGAAGTGATGCCTCAGGAACAATGGGTGGGGCATGTGGATATGGAAACCTCTACAGCCAAGGTTATGGAACAAATACTGCTGCTTTGAGCACTGCTTTGTTCAACAATGGTCTTAGTTGTGGCTCATGCTATGAGATAAGGTGTGTGAATGACCATAGGTGGTGCCTCCCTGGCTCCATTATGGTCACTGCCACCAATTTCTGTCCTCCAAACAATGCTTTACCAAACAATGCAGGAGGGTGGTGCAACCCTCCAATGCACCATTTTGACCTCTCTCAACCTGTTTTCCTTCGCATTGCACAATACAGAGCAGGAATTGTGCCTGTTTCCTACAGAAGGGTACCCTGCAGGAGAAGGGGAGGCATAAGGTTCACAATCAATGGCCACTCCTACTTCAACTTGGTCCTCATAACAAACGTAGGAGGTGCTGGGGATGTTCATGGTGTGGCCATCAAGGGGTCAAGAACAGGGTGGATGCCAATGTCCAGAAACTGGGGTCAAAATTGGCAAAGCAACAACTATCTCAATGGCCAAAGCCTCTCATTCAAGGTCACAACCAGTGATGGCCGTACAGCTGTGTCCTACAATGTTGCCCCTGCTGGTTGGTCCTTTGGCCAAACCTACACTGGTGCTCAATTCCGCTAG 753 0.4914 MAQICLLLVGLLSMFSSAYGYGYGGGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVNDHRWCLPGSIMVTATNFCPPNNALPNNAGGWCNPPMHHFDLSQPVFLRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHGVAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTAVSYNVAPAGWSFGQTYTGAQFR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00998 250 PANTHER EXPANSIN-A15 5 249 IPR002963 GO:0009664
Gma02g00998 250 Pfam Lytic transglycolase 62 147 IPR009009 -
Gma02g00998 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Gma02g00998 250 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Gma02g00998 250 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Gma02g00998 250 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Gma02g00998 250 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Gma02g00998 250 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Gma02g00998 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Gma02g00998 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Gma02g00998 250 SUPERFAMILY Barwin-like endoglucanases 26 175 IPR036908 -
Gma02g00998 250 SUPERFAMILY PHL pollen allergen 154 246 IPR036749 -
Gma02g00998 250 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Gma02g00998 250 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Gma02g00998 250 PANTHER EXPANSIN 5 249 - -
Gma02g00998 250 Gene3D - 157 249 IPR036749 -
Gma02g00998 250 SMART dpbb_1 62 147 IPR007112 -
Gma02g00998 250 Gene3D - 16 153 IPR036908 -
Gma02g00998 250 Pfam Expansin C-terminal domain 158 235 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00998 Gma-Chr2 10683705 10686005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00998 1 250 Expansin Gene Family AT2G03090 80.632 5.70e-151 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00998 - - gmx:100785757 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00998 02 10683705 10686005 Gma02g00998 02 10683705 10686005 ECH
Gma02g00998 02 10683705 10686005 Gma06g01752 06 17836215 17838699 ECH
Gma02g00998 02 10683705 10686005 Gma04g01631 04 44363370 44366477 ECH
Gma02g00998 02 10683705 10686005 Gma17g00953 17 8120474 8123768 ECH
Gma02g00998 02 10683705 10686005 Gma19g00216 19 2784944 2787319 ECH
Gma02g00998 02 10683705 10686005 Gma20g00327 20 4783736 4785890 ECH
Gma01g00461 01 5991245 5993454 Gma02g00998 02 10683705 10686005 GST