Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00997 ATGCCGACACTGAAACTCTCCCTCTTCGTCTCCCTCCCAAAACCCTTAAACCTCAGACCCCAATTTTCGCGCCACCCAATAAACCCAAACCCGACAACCTCGGACCGTGGCCTCGTATTCCACGAAAAAGTGCTCTACCTTAAAGCCCTCAAAGTGAACCCCGACAAGGCCTTCCGCTTAAACCCCACCCTCCGTTCCTCTCCTCTCTCAACCCTTAAATCGGTGACGCGCTCCCTTTCTTCATTGGGCATTCCACGCGCCTCCATGGGTCGAATCCTCGACATGCTCCCCGTGCTCCTCACGTGCGACCCCTATTTCCAATTCTACCCCCTCCTCGACTTCCTCCTCCACGAGGTCCCAATCCCCTACCACGACATCCACCTTTCAATCCTGCGCTGCCCTAGATTACTCGTTTCCAGCGTTAACAACCGATTGCGACCAACTTTACACTTTCTGAGGAAATTAGGGTTTAATGGGCCCCACTCGCTCACGTGTCAGACCACATTGCTTCTCGTTTCCAGCGTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGGGTTTGGGGTTCACTCACGAAGAGGTGGCTAACATGGTCGTGAGGTCACCTGGGTTGTTGACTCTTAGTGTGGAGAAGAATTTGAGGCCCAAGGTGGAGTTTTTCTTGAGGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCGCAGTATTTTTCTTTTAGCTTGGAACGGAGGATTAAGCCGCGGTACGGGATGCTGAGACGGGTTGGCGTGTCGATGGATTTGGAAGATATGTTGAAGGTTAGTGATGGCGGGTTTAAGGCTAGGTTGCTTGATTTGAGGTTTAAGAAACTTGAGATAGGAGTAGGACAACATTTGTAG 888 0.5124 MPTLKLSLFVSLPKPLNLRPQFSRHPINPNPTTSDRGLVFHEKVLYLKALKVNPDKAFRLNPTLRSSPLSTLKSVTRSLSSLGIPRASMGRILDMLPVLLTCDPYFQFYPLLDFLLHEVPIPYHDIHLSILRCPRLLVSSVNNRLRPTLHFLRKLGFNGPHSLTCQTTLLLVSSVEDTLLPKIEFLKGLGFTHEEVANMVVRSPGLLTLSVEKNLRPKVEFFLREMNGDVAELKRFPQYFSFSLERRIKPRYGMLRRVGVSMDLEDMLKVSDGGFKARLLDLRFKKLEIGVGQHL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00997 295 Gene3D Transcription termination factor 3, mitochondrial 41 287 IPR038538 -
Gma02g00997 295 PANTHER CGI-12 PROTEIN-RELATED 25 288 IPR003690 GO:0003690|GO:0006355
Gma02g00997 295 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 25 288 - -
Gma02g00997 295 Pfam mTERF 63 275 IPR003690 GO:0003690|GO:0006355
Gma02g00997 295 SMART mt_12 230 261 IPR003690 GO:0003690|GO:0006355
Gma02g00997 295 SMART mt_12 90 122 IPR003690 GO:0003690|GO:0006355
Gma02g00997 295 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Gma02g00997 295 SMART mt_12 55 85 IPR003690 GO:0003690|GO:0006355
Gma02g00997 295 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Gma02g00997 295 SMART mt_12 197 229 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00997 Gma-Chr2 10670440 10671729 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma02g00997 mTERF 1.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00997 K15032 - gmx:100785219 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00460 01 5965286 5967045 Gma02g00997 02 10670440 10671729 GST