Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00996 ATGGCCAGCAGCAAGTGTTGCATGATCTCTCCACAACAAAACCAGAATGCCCCCACATGTTATCCTTCACCAATGGGAATGGTCTATGCAGACATGATGGGGTCTCTCTCTCTTGCCACCGTTTCAAATAATGCTTCTTCATCACAAGAAAGTAATGGTTATAGTTATGGTTATGCCTCTGGGGTGGAAAATGCAAGGAGTACAAGGTGGAGTTTTCCTTTCACGAGGGAGTTTCTTTCTTCAAACTTTGAAGACTGCAGTGATGTAGTAGTAGGGGCTGGGGACAGTAACAACAACATTAATGAGAAAACAAACCATAATAATGGCAAGTTCAGTGAAGAAGAAAGTAACCCTAATGAGAACAACCCTGCCGGTGGCAAAGAGGTGGATAGTGGGCACTCCAAACTTTGTGCAAGAGGGCATTGGAGACCTGCTGAAGATTCCAAGCTCAAGGAGCTTGTGGCTCTTCATGGCCCTCAGAATTGGAACCTCATAGCTGAAAAACTAGAAGGAAGATCAGGGAAGAGTTGTAGGCTGAGGTGGTTCAACCAGTTGGATCCAAGGATCAACAGAAGAGCATTCAGTGAAGAAGAAGAAGAGAGGCTAATGCAGGCACATAGAATTTATGGGAACAAATGGGCCATGATTGCAAGGCTTTTTCCTGGGAGAACAGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGGGAACAATCCAGTGCTTACAGGAGGAGGAGAATGAGCCAACCTGTGTACAGAAGAGTGGATCAAAATCCAACCTTTGTTTGCAGCAGCAGAGATAATAATGCCTCAACCACAGAACCAGAACCAGAATCATCACCTTCCTATTATCCCAATCTCAATGACCGTGGAGTAGCACTCACCAATAACATGGCTAGTTTCCCATCCTTACATGGAGTAGCTGCTGGTGCTGGTGGAGTTGTTGAGTTTGGCTCAAATGTTTCTCCACTAAACATGACTAGAGGTAGAGAAGCAGTGTCAAACACCACACATGTTGGCTTGTGTGCTCAAGCTCAACAACAAGCACCATTTGATTTCTTCTCTGGTGGTGGAAGCCATGACATGGTGTTGGAGTCTATGAGCCAGATGAGAAGCAGGGAAAGGACCAATGAATCTTACAATCATCATTGCCAATTATCTGGTTTCTACCCTCATCATCCCCAACAATATTTGATGGCAATGCAACAACAGCTAGACAACAACAATTTTTACAGTTTCTTGAATTCCTCATCATCAGCATCAACAACAAGAACTAGGGAACCATCATCACCATGTGTTGCAGAAATCAGAGATAAAGTGGTGAATAGTGACCCCCCAGATGGTGTTCCACCCCCATTTTTTGACTTCTTTGGAGTAGGAGCCACATGA 1404 0.4437 MASSKCCMISPQQNQNAPTCYPSPMGMVYADMMGSLSLATVSNNASSSQESNGYSYGYASGVENARSTRWSFPFTREFLSSNFEDCSDVVVGAGDSNNNINEKTNHNNGKFSEEESNPNENNPAGGKEVDSGHSKLCARGHWRPAEDSKLKELVALHGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRMSQPVYRRVDQNPTFVCSSRDNNASTTEPEPESSPSYYPNLNDRGVALTNNMASFPSLHGVAAGAGGVVEFGSNVSPLNMTRGREAVSNTTHVGLCAQAQQQAPFDFFSGGGSHDMVLESMSQMRSRERTNESYNHHCQLSGFYPHHPQQYLMAMQQQLDNNNFYSFLNSSSSASTTRTREPSSPCVAEIRDKVVNSDPPDGVPPPFFDFFGVGAT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00996 467 CDD SANT 142 183 IPR001005 -
Gma02g00996 467 SUPERFAMILY Homeodomain-like 139 232 IPR009057 -
Gma02g00996 467 ProSiteProfiles Myb-like domain profile. 139 185 IPR001005 -
Gma02g00996 467 CDD SANT 193 233 IPR001005 -
Gma02g00996 467 Gene3D - 192 259 - -
Gma02g00996 467 PANTHER MYB PROTEIN-RELATED 25 467 - -
Gma02g00996 467 Pfam Myb-like DNA-binding domain 191 234 IPR001005 -
Gma02g00996 467 Pfam Myb-like DNA-binding domain 139 185 IPR001005 -
Gma02g00996 467 MobiDBLite consensus disorder prediction 94 124 - -
Gma02g00996 467 ProSiteProfiles Myb-like domain profile. 186 236 IPR001005 -
Gma02g00996 467 SMART sant 190 238 IPR001005 -
Gma02g00996 467 SMART sant 138 187 IPR001005 -
Gma02g00996 467 MobiDBLite consensus disorder prediction 94 132 - -
Gma02g00996 467 MobiDBLite consensus disorder prediction 263 291 - -
Gma02g00996 467 PANTHER MYB TRANSCRIPTION FACTOR 25 467 - -
Gma02g00996 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 240 IPR017930 -
Gma02g00996 467 Gene3D - 139 190 - -
Gma02g00996 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 185 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00996 Gma-Chr2 10641123 10642997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00996 113 264 MYB Transcription Factor Family AT1G69560 71.250 1.83e-76 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma02g00996 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00996 K09422 - gmx:100789305 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00996 02 10641123 10642997 Gma02g00996 02 10641123 10642997 ECH
Gma01g00457 01 5917748 5919692 Gma02g00996 02 10641123 10642997 GST