Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00993 ATGGATCCACAAAACATGCAAAACCAAACCATGCATTTTGTGCTGTCCACTGATTCCAAACCAAGGCTAAAATGGACTCCTGAGCTTCACCGACGATTCATTGAGGCTACCAATCAGCTTGGAGGTGAAGATAAAGCAACTCCAAAGAGTCTCATGAGGGTGATGGGGATTCCAGGACTCACTTTGTACCATCTGAAGAGCCATTTACAGGCATTCATTCCCCTTTTACTTGGAAAAAGCCAACAACTAGAAACCTGTTCTGACAACAAACAAGAAGATTACATAGAAACCAAGAGCAGCAGTGATGGTCATTGCAGCAGGGAAATCAGTCTTGGGGCCCAGAATCAAATTACTGAAAACATGCAGATTGCTCAAGCTCTCCAAATGCAAATGGAAGTGCAAAGGAAACTCTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTCAGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTAAAGAAGGCACAAGAAGCACTTGCTGGATACAATTCTTCCCCAGTTGGGATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATCATCAACGATGCTTGTCCAAGTTCTCCCATCTCAGAACTGACAGAAACAAGAGGGTTGAGTTTAAGCTGTGGGGAGAGGAAAAGAGACAGAGGCACTATGTGTTCACTGGAAAGTTCCTTGACATCTTCTGAAAGCTCAGGGAGAAAGGAAGAGAAACAGCCAATGGAAGAGATTGTGGAATTCAAGAGTTCCAATAATGTTTCATTTGAATTGCCATTGATGGAGATTCACACTGAGGATAAAGCATCCAATGGAGGCTTATCAAGCAATGAGGGTAGTGGGAGAAAGAGAAGTTTAGCAGCAACAGAATCTGATGATGGAAGCTGTGTTGTTGAGCAACCATGTGGGAAAAGATGTGGCAACAAGTTGTTGAGGAAAGTCAAGTTGTCAGAAATGCTTGACTTGAACAGCCAATGTCAGAGTGACATGGACTCAACAGGTTCAAAAACATTGGACTTAAATTGCAGTTTAAACTTTTGGGAACCATGA 1065 0.4235 MDPQNMQNQTMHFVLSTDSKPRLKWTPELHRRFIEATNQLGGEDKATPKSLMRVMGIPGLTLYHLKSHLQAFIPLLLGKSQQLETCSDNKQEDYIETKSSSDGHCSREISLGAQNQITENMQIAQALQMQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINDACPSSPISELTETRGLSLSCGERKRDRGTMCSLESSLTSSESSGRKEEKQPMEEIVEFKSSNNVSFELPLMEIHTEDKASNGGLSSNEGSGRKRSLAATESDDGSCVVEQPCGKRCGNKLLRKVKLSEMLDLNSQCQSDMDSTGSKTLDLNCSLNFWEP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00993 354 MobiDBLite consensus disorder prediction 224 247 - -
Gma02g00993 354 SUPERFAMILY Homeodomain-like 19 73 IPR009057 -
Gma02g00993 354 Pfam MYB-CC type transfactor, LHEQLE motif 121 167 IPR025756 -
Gma02g00993 354 Coils Coil 124 144 - -
Gma02g00993 354 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 72 IPR006447 GO:0003677
Gma02g00993 354 MobiDBLite consensus disorder prediction 271 295 - -
Gma02g00993 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 351 IPR044848 GO:0003700
Gma02g00993 354 Gene3D - 19 72 - -
Gma02g00993 354 MobiDBLite consensus disorder prediction 274 289 - -
Gma02g00993 354 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00993 Gma-Chr2 10582048 10583826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00993 11 310 G2-like Transcription Factor Family AT1G69580 49.201 2.51e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma02g00993 Myb_CC_LHEQLE 6.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00993 - - gmx:100787178 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00993 02 10582048 10583826 Gma02g00993 02 10582048 10583826 ECH
Gma01g00451 01 5819046 5821218 Gma02g00993 02 10582048 10583826 GST