Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00991 ATGTTCCAGATCCTTCCACAACATTCTCTCAGTATCATATCAGTGGGCGCAGCCCCCCTCCTCTGTTTTCCCCTTATATTCACTCCCCTTTCCACCTTCTTCTTCATTATTCTTCTCTTCTCACAATTATTCCACAAAATTTCCCTCAATTATTTCTCACCATCATCACCCCCTTTCCTTCTCTCAAGAAAAAAAAAAGTTAATTTCTTGAACCCAATGGCTTCAGAGACAGAGGTGCCGGATATTATTTCCTCTGTTTTCGAAAGGTTTCAACAAAACAGAGACATGTCTCTGTTTCTGCCCTTCCTCTTCGGCTTCTCTGACGCCACCCCAGGACGAAATAGCGACGACCCAGATCACGAAACTGCTCCCACAGAAGCCCCACAACGTCAAAGAATAATCTTGGTGAACCCCTTGACTCAGGGCATGGTGGTGATCGACGGTGGTTCGAGCCTCGAGGCTCTGTTTCGCGAATTCACCAACGGAAAAGGTGGTCGACCACCGGCTTCTAAGGAGTCCATTGAGGCCTTGCCGAGTGTGGAAATTGGAGAAGGTAACGAAGATTCGGAGTGTGTGGTTTGTTTGGAGGAGTTTGGGGTTGGTGGGGTGGCAAAGGAGATGCCATGTAAGCATAGGTTTCATGGTAATTGTATTGAGAAGTGGTTGGGGATGCATGGGTCTTGCCCTGTGTGTAGGTATGAGATGCCTGTGGAGGAGATTGATTGGGGGAAGAAGAGGGAGGAGGAAGGTGGTGAGAGGAGAAGGAGTGATGGTGGTGAAGTTTGGGTTAGTTTTTCTTTCAATAGGAGTAGTAGAAGAAACCAAGATCATGATCAAGCTGATTCTGGTGATTCAAATGATGATGATGGTTCTTCATCAAGTCATGGAGATGGTGCTGCTGAAGAGAGTTAG 912 0.4682 MFQILPQHSLSIISVGAAPLLCFPLIFTPLSTFFFIILLFSQLFHKISLNYFSPSSPPFLLSRKKKVNFLNPMASETEVPDIISSVFERFQQNRDMSLFLPFLFGFSDATPGRNSDDPDHETAPTEAPQRQRIILVNPLTQGMVVIDGGSSLEALFREFTNGKGGRPPASKESIEALPSVEIGEGNEDSECVVCLEEFGVGGVAKEMPCKHRFHGNCIEKWLGMHGSCPVCRYEMPVEEIDWGKKREEEGGERRRSDGGEVWVSFSFNRSSRRNQDHDQADSGDSNDDDGSSSSHGDGAAEES 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00991 303 SUPERFAMILY RING/U-box 186 237 - -
Gma02g00991 303 SMART ring_2 191 231 IPR001841 -
Gma02g00991 303 CDD RING-H2_PA-TM-RING 190 232 - -
Gma02g00991 303 ProSiteProfiles Zinc finger RING-type profile. 191 232 IPR001841 -
Gma02g00991 303 Pfam Ring finger domain 190 232 IPR001841 -
Gma02g00991 303 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 84 244 - -
Gma02g00991 303 MobiDBLite consensus disorder prediction 266 303 - -
Gma02g00991 303 MobiDBLite consensus disorder prediction 288 303 - -
Gma02g00991 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 238 IPR013083 -
Gma02g00991 303 PANTHER - 84 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00991 Gma-Chr2 10572732 10573986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00991 76 286 C3H Transcription Factor Family AT1G26800 54.717 7.03e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00991 - - gmx:100819587 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00991 02 10572732 10573986 Gma02g00991 02 10572732 10573986 ECH
Gma01g00448 01 5781221 5782212 Gma02g00991 02 10572732 10573986 GST