Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00981 ATGGACCTAACCAAGGACACAAATTCTCAAACCCCTCCACAACCCAACACCACCACAAACGGTTCCCTCAAGCACCACCACCACCACCCAACCACCGTGTCACCGCCGCAACAGCCACCCTCCACGACGGTTTTCTACAAAGAGTGCCTCAAAAACCATGCAGCCAGCATAGGTGGTCACGCGCTTGATGGGTGCGGTGAATTCATGCCCTCTTCTTCATCCAACCCCAATGAACCGCGCTCGCTAACGTGCGCCGCGTGCGGATGCCACCGTAACTTCCACCGCCGCCGCGACACACAGGAAAATCATCACCGCTCCAACTCCAGGCCCAATTTCATAAGCTTCTACCACTCTCCGCCGCTGTCTCGTCACGGGCCGGGCCTGAGCCCAACTCCAAGCCCGATGTCGAGCCCAAGCCCGAGCCCCCCGCCAATCTCGCATCATTTCCCACCTTCCTCCCACCATTTCCAAGGTCCAATACCGGCCCACGGGCTTTTGGGCCTTGGAAATGAAAATCACCATCATCACATGAGTTTTAATTTTAACTCTTCTTCCCACTCCACCCAAGGAAACACGAGTGGAAAGAAGAGGCATAGGACCAAGTTCAGCCATGAACAGAAACAAAAAATGTACAATTTCGCCGAGAAATTGGGTTGGAGAATGCAGAAAGCAGAAGAAGGATTGGTGCAAGATTTCTGCAACGAGATTGGCGTTTCAAGAGGGGTCTTCAAGGTGTGGATGCACAACAACAAGAACACTTCTGCCAGGAACAAATCGTTGGAACCAGAATTTCAAGAAGTCTTCGATGGAAATGAAGTTAAGTGGTTGTGA 831 0.5223 MDLTKDTNSQTPPQPNTTTNGSLKHHHHHPTTVSPPQQPPSTTVFYKECLKNHAASIGGHALDGCGEFMPSSSSNPNEPRSLTCAACGCHRNFHRRRDTQENHHRSNSRPNFISFYHSPPLSRHGPGLSPTPSPMSSPSPSPPPISHHFPPSSHHFQGPIPAHGLLGLGNENHHHHMSFNFNSSSHSTQGNTSGKKRHRTKFSHEQKQKMYNFAEKLGWRMQKAEEGLVQDFCNEIGVSRGVFKVWMHNNKNTSARNKSLEPEFQEVFDGNEVKWL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00981 276 MobiDBLite consensus disorder prediction 1 40 - -
Gma02g00981 276 Gene3D - 180 257 - -
Gma02g00981 276 MobiDBLite consensus disorder prediction 125 149 - -
Gma02g00981 276 SUPERFAMILY Homeodomain-like 182 254 IPR009057 -
Gma02g00981 276 MobiDBLite consensus disorder prediction 175 191 - -
Gma02g00981 276 Pfam ZF-HD protein dimerisation region 44 97 IPR006456 -
Gma02g00981 276 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 28 257 - -
Gma02g00981 276 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 28 257 - -
Gma02g00981 276 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 46 96 IPR006456 -
Gma02g00981 276 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 46 97 IPR006456 -
Gma02g00981 276 MobiDBLite consensus disorder prediction 1 21 - -
Gma02g00981 276 MobiDBLite consensus disorder prediction 97 204 - -
Gma02g00981 276 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 195 252 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00981 Gma-Chr2 10463279 10468705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00981 44 263 ZF-HD Transcription Factor Family AT1G69600 46.364 2.16e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma02g00981 ZF-HD_dimer 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00981 - - gmx:100785050 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00981 02 10463279 10468705 Gma02g00981 02 10463279 10468705 ECH