Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00979 ATGGAAGAGAGAAATAATAATGATGCTGCTGAGAAACTGGATGAAGTTATGCTACCAGGGTTTAGGTTTCATCCAACTGATGAGGAGCTTGTAGGGTTTTACCTCAAGAGAAAGATTCAACAACGCCCTTTGACTATTGAGCTCATCAAGCAGCTTGATATCTACAAATTTGACCCTTGGGATCTTCCAAAGTTGGCCACCACAGGAGAAAAAGAGTGGTATTTCTACTGTCCCAGGGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCTACAGGGACTGATAGGCCTATCTACTCCTCAGAAGGTTCAAAGTGCATTGGCCTCAAGAAATCCCTAGTCTTTTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTCAGGCTACCTTCTCTCACTGACTCACTATCTCCAAAGTACATAGACAAGATCACCATTCCTGCTAATGAATCTTGGGCTATCTGCAGGATATTCAAGAAAACCAATGCTACAGCTCAAAGAGCTTTGTCTCACTCTTGGGTCTCTTCCCTACCTGAAACAAGAACCTCTGATCATCATATCCTAACCAAAGATCAAGACAACACTACCCAGTTTTGTTCAGACAACATGTCAATGACAAAGAAAACTACCTTAGCCAGCCAGTACTGTTCTAACAATTACAATGATTCACAACCCTTAACCACTAATAGCAGTACTCTTTGTCCCTTAGATGTGGCCTCATGCAAATCCATCATTAACCCATTGCTTTACAAAGCCTTTGATCATTTTCCCATTTCAAATGAAGACCTTAGCACTAGCTTGTTATTCTCATCACCCCCCTTTGAAACATCAGAAACTAATCCCAAATCTACAATAATGGACGTTTCTTCCATGCTGTTGAACATGTCATCCTCAGTGCTTGGAGATTTTAACAAGACTACTTCAGAGGACACAAATACAAATGCAGCTTCAAACTTTGGTGTGTTGCAAGAGCACTGTAGTGGCTACCCAATACCATTTCTACGTGAGAATATGCAAACCACATTTGGTAACCAGCAACAACAATATTGTGATAATATTTATGCATTGGTAAAGGGTCCTAATGTGAATGTGCCTCGTGTTGATGACCCAGAGTTGGAGTTGGAGACAGTAGTACAACGATCCATTGGGTTTCCATTAAGTGTTACTATGCCTTTGAATATTGGAGATGCCTGGAAGTCAAATAATCTGCTTTGGGATACTTCCTCTTTTCCTTGTGATGTGCCATCTAGTTATTATTCCACAACTAAGTGCTATACTTAG 1326 0.4103 MEERNNNDAAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLTIELIKQLDIYKFDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSPKYIDKITIPANESWAICRIFKKTNATAQRALSHSWVSSLPETRTSDHHILTKDQDNTTQFCSDNMSMTKKTTLASQYCSNNYNDSQPLTTNSSTLCPLDVASCKSIINPLLYKAFDHFPISNEDLSTSLLFSSPPFETSETNPKSTIMDVSSMLLNMSSSVLGDFNKTTSEDTNTNAASNFGVLQEHCSGYPIPFLRENMQTTFGNQQQQYCDNIYALVKGPNVNVPRVDDPELELETVVQRSIGFPLSVTMPLNIGDAWKSNNLLWDTSSFPCDVPSSYYSTTKCYT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00979 441 SUPERFAMILY NAC domain 15 175 IPR036093 GO:0003677|GO:0006355
Gma02g00979 441 Pfam No apical meristem (NAM) protein 19 144 IPR003441 GO:0003677|GO:0006355
Gma02g00979 441 Gene3D NAC domain 26 180 IPR036093 GO:0003677|GO:0006355
Gma02g00979 441 ProSiteProfiles NAC domain profile. 17 175 IPR003441 GO:0003677|GO:0006355
Gma02g00979 441 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 439 - -
Gma02g00979 441 PANTHER PROTEIN FEZ ISOFORM X1 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00979 Gma-Chr2 10430739 10432752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00979 6 318 NAC Transcription Factor Family AT1G26870 56.135 1.05e-110 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g00979 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00979 - - gmx:100783995 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00979 02 10430739 10432752 Gma02g00979 02 10430739 10432752 ECH
Gma01g00431 01 5544852 5546740 Gma02g00979 02 10430739 10432752 GST