Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00970 ATGAACGTGGATCTGGAATCATTGGCAGAGGCAACTTCCGGGGCCATAGGATCACTGATCAGCACCACTATTCTCTACCCCCTTGACACCTGCAAGACCAAGTACCAGGCTGAGGCACGTTCCTCAGGTCGAACAAAATACAGGAATCTCACTGATGTATTATTGGAGGCAATATCTAACCGTCAGGTGCTTTCACTTTACCAGGGCCTTGGAACAAAGAATCTTCAATCCTTCATTTCACAatttgtctacttctacggatacagctattttaaaagactgtatctagaaaaaagtggttataaatccattggaacaaaagcaaacttggttattgctgctgctgctggggcttgcacagccattgcgactcagCCTCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGAATTTGGAAAGTCTAAAGGGCTACTGAAGACCCTTACAGAAGGAAACTGGAGTGATGCATTTGATGGCCTCAGTATTTCCTTGCTGCTGACATCAAACCCTGCAATTCAGTATACGGTGTTTGATCAGCTTAAACAACGAGCACTGAAGAATAAACAAGACAATGCTGATAAAGGAACATCTCCAGCGTCCCTTTCTGCATTTATGGCCTTTCTTTTAGGTGCAATTTCAAAGAGCATTGCTACCTGTCTAACATATCCAGCTATCAGGTGCAAAGTTATCATTCAAGCTGCAGACTCAGCTGAAGAAACCTCCAAAACAAAGATAAAATCACAGAAAACAGTGCTTAGTGTTCTCTATGGAATATGGAAAAGGGAGGGCATACTGGGATATTTTAAAGGATTGCATGCTCAGATCTTAAAAACTGTTTTGAGCTCAGCACTGCTCTTAATGATCAAGGAAAAGATCTCTGCTTCTACCTGGGTGCTTATCCTTGCACTTAAAAGGGTGGTGCTGTTTCGTATTCTTTTTATTGGCGGCAAAATGCCAGAAGATATTGTTTACCAACACCCTTTGTTTGGTGGCAAAATAGCTAGCACATTCCCCCACAGATTCCAGGATGTCAGCAATATTCGACAAGTCCCTGATCATCAGGAGGTATTTGCGGATCCGAGCCACGATGAAAGCTTGATCTTTGAGCTTTTAGAATTCAAGCCTGATGTTGCTGATAATGGGAGTGCTGCATGGTTTCTTCAAGACCTTGCTACTGAACAGGATGCTGAAGGAAGTGTGGTTATTGAGCAGTCAGGAGTTCTTGAAGCACCTGGTTTGATGTACAAGAATATGCCTGCAGTTGTAATAACTGCAGTGGGTCAAATGGCAATTTCTAAAGGACGGCAAGGAAGGGAAGCACAAAATTTTGTGAAAGTAGTTTCTGTTTTTCTTCAAATTTTGCAAATGCTAATTAGACACTGTTCCTACATTGACTGGTCTGAGTCATTCCAAAATTGTTTCATTTCTTCAGGTTTATTTGGCAAATTTGCATCTTAA 1461 0.3833 MNVDLESLAEATSGAIGSLISTTILYPLDTCKTKYQAEARSSGRTKYRNLTDVLLEAISNRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGYKSIGTKANLVIAAAAGACTAIATQPLDTASSRMQTSEFGKSKGLLKTLTEGNWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQDNADKGTSPASLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADSAEETSKTKIKSQKTVLSVLYGIWKREGILGYFKGLHAQILKTVLSSALLLMIKEKISASTWVLILALKRVVLFRILFIGGKMPEDIVYQHPLFGGKIASTFPHRFQDVSNIRQVPDHQEVFADPSHDESLIFELLEFKPDVADNGSAAWFLQDLATEQDAEGSVVIEQSGVLEAPGLMYKNMPAVVITAVGQMAISKGRQGREAQNFVKVVSVFLQILQMLIRHCSYIDWSESFQNCFISSGLFGKFAS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00970 486 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Gma02g00970 486 Pfam Ran-interacting Mog1 protein 328 453 IPR007681 -
Gma02g00970 486 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Gma02g00970 486 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Gma02g00970 486 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Gma02g00970 486 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 310 - -
Gma02g00970 486 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 324 458 - -
Gma02g00970 486 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Gma02g00970 486 SUPERFAMILY Mog1p/PsbP-like 325 452 IPR016123 -
Gma02g00970 486 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Gma02g00970 486 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 310 IPR045900 GO:0005347|GO:0006635|GO:0015217
Gma02g00970 486 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Gma02g00970 486 Pfam Mitochondrial carrier protein 202 293 IPR018108 -
Gma02g00970 486 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Gma02g00970 486 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Gma02g00970 486 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00970 Gma-Chr2 10343257 10353486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00970 23 291 Chloroplast and Mitochondria Gene Families AT1G25380 29.123 6.77e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00970 - - gmx:100301879 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00970 02 10343257 10353486 Gma02g00970 02 10343257 10353486 ECH
Gma01g00420 01 5360191 5375920 Gma02g00970 02 10343257 10353486 GST