Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00969 ATGGAATTGGAAGCTGATCATCAAAATGGGATTCGAAGCAGACTCAATTTCCCTCTGCAGCTGTTAGAGAAAAAGGACATTGATGACGTCACGGAACAACCTTGTtccaccaccagcgtggtaactgctactactactgctattactactactactacttcagataacaacgacctccactTGGCGGAGCAGTCCAAGAAGCCTCCGCCGAAACGGAGTTCCACCAAGGACCGCCACACGAAGGTCGATGGGCGAGGCCGCCGGATCCGCATGCCGGCGGCCTGCGCTGCCAGAGTGTTCCAGCTCACGCGTGAGCTGGGACATAAGTCTGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCCGCCGTCATCGCCGCCACTGGGACAGGCACCATTCCCGCCAACTTCACCTCCCTCAACATCTCCCTCCGCAGCTCTGGCTCCACCATGTCGGCCCCGTCGCACTACTTCCGCGGAAACTACTTCAACCCTAGCACGTTCTCCACGTCCGCCGCCGCGGCGGCGGCGGCTCAGCTGAGAAGCCGCGCAGAGTGGGACCGGAGCATGAGCATGGTGATGGAGGATTCTCGAAGGAGCATGCTGGAGAACACTTCTTCAATCTCCGCAATTTTGAATTTCAACCCTATGGGTAACGTTAATGTAATTCAACAAGCGAAACAAGAGCTTCGGGAAGAATCCGGCGGGGGCGGCGGTCTTGAATCGGTGGCTTCTGATTCCGATGGAAGCTTAGGGAGAAAGAGAAGGCCAGAGCAAGAACTATCACAAATGGGAAGCTATTTGATACAATCAAGCACAGGGTCGCTTCCGGCGAGCCACGCTTCCAATACGGCGGCGTTTTGGATGGTGGCGGGTCACGGCAACCAAGCCATGAGTGGTGGTGGCAGCGGCGGCGGTGGCAACAATGGTAGCAGCGATAATAATCCCATTTGGGCAATTCCCTCTGTTGGGAATAGTGGTGTGTATAGAGGAGCTATGTCTGCTCCAGGTGGCATTCATTTCATGAATTTCGCTTCTCCGATGAACCTTATGCCCGGAGGTCAACTAGGTTCCGGTATCGTTGGTGGCGGTGGCGGCGGTGGTGGCAACGGCGGTGCTCAACTTCTAAGTGAAAGTAACTTAGGCATGCTTGCAGCCCTTAATGCCTACAGGCAGATTCCGGCGAACGGCGTCTCGGAGCCTCCGGGCAGTGCCGGGCAACATCACAGCGGAGACGATGGACGTGATTCCACCAGTCAACATTCCTGA 1275 0.5341 MELEADHQNGIRSRLNFPLQLLEKKDIDDVTEQPCSTTSVVTATTTAITTTTTSDNNDLHLAEQSKKPPPKRSSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSTFSTSAAAAAAAQLRSRAEWDRSMSMVMEDSRRSMLENTSSISAILNFNPMGNVNVIQQAKQELREESGGGGGLESVASDSDGSLGRKRRPEQELSQMGSYLIQSSTGSLPASHASNTAAFWMVAGHGNQAMSGGGSGGGGNNGSSDNNPIWAIPSVGNSGVYRGAMSAPGGIHFMNFASPMNLMPGGQLGSGIVGGGGGGGGNGGAQLLSESNLGMLAALNAYRQIPANGVSEPPGSAGQHHSGDDGRDSTSQHS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00969 424 MobiDBLite consensus disorder prediction 230 264 - -
Gma02g00969 424 MobiDBLite consensus disorder prediction 60 86 - -
Gma02g00969 424 Pfam TCP family transcription factor 74 205 IPR017887 -
Gma02g00969 424 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 4 424 - -
Gma02g00969 424 MobiDBLite consensus disorder prediction 396 424 - -
Gma02g00969 424 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
Gma02g00969 424 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 424 IPR005333 GO:0003700
Gma02g00969 424 MobiDBLite consensus disorder prediction 52 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00969 Gma-Chr2 10320039 10322002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00969 17 357 TCP Transcription Factor Family AT3G47620 42.132 1.42e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma02g00969 TCP 3.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00969 - - gmx:100781296 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00969 02 10320039 10322002 Gma02g00969 02 10320039 10322002 ECH
Gma01g00418 01 5321213 5322475 Gma02g00969 02 10320039 10322002 GST
Gma02g00969 02 10320039 10322002 Gma17g00934 17 7975100 7976561 PCT
Gma02g00969 02 10320039 10322002 Gma05g00267 05 2431464 2433175 PCT