Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00964 ATGGCCTCAACCACAACCCAAGGTGCTCTCAAAACCCCACCCCAATTTCAAATTTCACCTTTAGCCCAATTCAACAAGCAACTCCCGAAAATTAATTTCGTGAAGAAAAAAAGAAAAAAAGATGAGCTGGAAAAGGTACTAAATCTAAAGTTGGACGAAATGTGGATCCAAGGATTCAGTTTTTGGATCAAAGGTTTCTCTTTGCTGGCCTTAATATCTGTAATTTCCGCTCTGGAACCCGAACTGGGATCGACCCGCGTCGTCTTTCAGACAAAGTATGGAGATATTGAATTTGGTTTCTATCCAACTGTTGCACCTAAAACTGTGGACCACATTTATAAGCTTGTGCGACTTGGAGGCTATAACACTAACCATTTCTTTCGGGTGGATAAGGGATTCGTGGCCCAAGTAGCAGATGTTACAAATGGAAGATCAGCTCCAATGAACGAGGAACAAAGAAGGGAAGCTGTAAAGACTGTTGTTGGTGAATTTACTGAAGTCAAACATGTTCGGGGTATTCTTTCCATGGGAAGATATGATGATCCAGACAGTGCTTCATCTTCATTTTCAATACTACTTGGAGATGCCCCTCATCTTGATGGCAAGTATGCAATATTTGGAAAAGTTACTAAAGGTGATGAAACGTTGACAAAGCTCGAGCAACTACCTACCCGCAAAGAGGGTATATTTGTAATGCCGATGGAACGCATCACTATCCTGTCGTCATATTACTATGATACAGAGACAGAAAATTGCGAGGAAGACAGATCAATTTTGAAGCGCAGACTAGCCGCCTCAGCTATTGAAGTTGAAAGACAGAGGATGAAATGCTTCCCCTGA 840 0.4179 MASTTTQGALKTPPQFQISPLAQFNKQLPKINFVKKKRKKDELEKVLNLKLDEMWIQGFSFWIKGFSLLALISVISALEPELGSTRVVFQTKYGDIEFGFYPTVAPKTVDHIYKLVRLGGYNTNHFFRVDKGFVAQVADVTNGRSAPMNEEQRREAVKTVVGEFTEVKHVRGILSMGRYDDPDSASSSFSILLGDAPHLDGKYAIFGKVTKGDETLTKLEQLPTRKEGIFVMPMERITILSSYYYDTETENCEEDRSILKRRLAASAIEVERQRMKCFP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00964 279 CDD cyclophilin 88 241 - -
Gma02g00964 279 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 94 244 IPR002130 GO:0000413|GO:0003755
Gma02g00964 279 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 87 240 IPR002130 GO:0000413|GO:0003755
Gma02g00964 279 Gene3D - 76 251 IPR029000 -
Gma02g00964 279 SUPERFAMILY Cyclophilin-like 84 246 IPR029000 -
Gma02g00964 279 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 66 279 IPR044233 -
Gma02g00964 279 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 66 279 - -
Gma02g00964 279 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 187 IPR002130 GO:0000413|GO:0003755
Gma02g00964 279 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 115 IPR002130 GO:0000413|GO:0003755
Gma02g00964 279 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 138 IPR002130 GO:0000413|GO:0003755
Gma02g00964 279 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 201 216 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00964 Gma-Chr2 10227339 10239169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00964 87 245 U-box Gene Family AT5G67530 27.711 2.31e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00964 - - gmx:100819238 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00964 02 10227339 10239169 Gma02g00964 02 10227339 10239169 ECH
Gma01g00412 01 5107468 5112097 Gma02g00964 02 10227339 10239169 GST