Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00940 ATGACCTTGTTGACCGTGGAAGATCAAAGTTTGCATGATATGAACTTCTTGTGGGAAAATCATTCATGGGATCCCTCCAATTCTGATAATTCGGGTGAAAGTAAAGAAAACATGAAATCACTTGATCAGGTAGAAGAAAAAGATGAAGCTCTCATGAATAAGAAACGAAATCGAGACCAAGGCAATATTACTAGTGGTGAAGGGAAAGGTGAAAAATGTCGTGAATCTGATCATGAAATGCATATATGGACCGAGAGAGAAAGGAGGAAGAAAATGAGGAACATGTTTGCCAGTCTTCATGCTTTGCTTCCACATCTTCCTTCCAAGGCTGATAAATCAACCGTTGTGGATGAAGCAGTGGCATACATTAAAAATCTTGAGAAAACCCTGGAAAAGCTAGAGAAACAGAAACAAGAAAGGGTCCAATGTGTCTCCACTTTTGGGTGTGAACCATCCATGTTTGTGACTGGTCAGGGATCTTCTAATAACAACATTTCCAATGCAATAATTGGAACTACTTCAAATGCACTTTCATTCCCTGTAGCTTTTGACAAGACTTGGGCTTCTTCAAATTTGGTCTTGAACATTTTTGGAGATGAAGCCCAATTCTCCATTTGCACAGCCCATAAGCCAGGCCTCATGACTACCATTGGTTTTGTGCTGGAGAAGTACAAGATTGAGGTCATAACTGCCAACATTTCGTGCATTGGTTATGGAAATGCTTGCATGATTCAAGCCCATGCAAAACAAGCTTTGGATGCAGACTCAACTGAGGAAACTTTCAAGAAAGTAGCTGAAGAGATTATGCCATGGATCGCTTAA 822 0.4027 MTLLTVEDQSLHDMNFLWENHSWDPSNSDNSGESKENMKSLDQVEEKDEALMNKKRNRDQGNITSGEGKGEKCRESDHEMHIWTERERRKKMRNMFASLHALLPHLPSKADKSTVVDEAVAYIKNLEKTLEKLEKQKQERVQCVSTFGCEPSMFVTGQGSSNNNISNAIIGTTSNALSFPVAFDKTWASSNLVLNIFGDEAQFSICTAHKPGLMTTIGFVLEKYKIEVITANISCIGYGNACMIQAHAKQALDADSTEETFKKVAEEIMPWIA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00940 273 Pfam Helix-loop-helix DNA-binding domain 81 127 IPR011598 GO:0046983
Gma02g00940 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 126 IPR011598 GO:0046983
Gma02g00940 273 PANTHER TRANSCRIPTION FACTOR BHLH95 14 271 - -
Gma02g00940 273 PANTHER - 14 271 IPR044278 GO:0003700|GO:0006355|GO:0009960
Gma02g00940 273 Coils Coil 116 143 - -
Gma02g00940 273 MobiDBLite consensus disorder prediction 19 78 - -
Gma02g00940 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 139 IPR036638 GO:0046983
Gma02g00940 273 SMART finulus 84 132 IPR011598 GO:0046983
Gma02g00940 273 MobiDBLite consensus disorder prediction 35 62 - -
Gma02g00940 273 MobiDBLite consensus disorder prediction 20 34 - -
Gma02g00940 273 CDD bHLH_AtbHLH_like 81 134 IPR045239 -
Gma02g00940 273 Gene3D - 73 146 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00940 19 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 35.216 8.94e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g00940 HLH 3.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00940 - - gmx:102665879 496.508