Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00881 ATGAGCAGTTTTCAGTTTCACTTGAGAGTTTTGAGTTTGCTGATTTCAGTTTCATACTTGCTGACGTGTTTGGGGAACAATGACATACCTGTCCAGTTGAATGATGATGTTCTTGGCCTAATTGTGTTCAAATCAGACCTTGATGACCCTTCTTCTTATCTTGCTTCATGGAATGAAGATGATGCCAATCCATGTTCATGGCAGTTCGTGCAGTGCAATCCTGAGAGTGGAAGAGTTTCTGAGGTCTCATTGGATGGCTTAGGACTATCTGGGAAGATTGGAAGAGGTCTTGAGAAGTTACAGCATCTAACGGTATTATCCCTTTCTCACAACAGCTTGAGTGGCAGTATTAGTCCATCACTTACTCTTTCCAATAGTCTTGAGAGGCTGAACCTTAGTCACAATGCTCTTTCTGGTTCCATTCCTACTTCTTTTGTGAATATGAATTCAATAAGATTTCTTGATCTTTCAGAGAATTCATTCTCAGGACCAGTCCCTGAGAGTTTTTTTGAGAGCTGTTCTTCCCTTCACCACATTTCTCTAGCTAGGAACATATTTGATGGACCAGTTCCTGGCTCACTGTCTAGATGTTCCTCATTGAATAGCATTAATCTTTCCAATAACCGTTTCTCCGGTAATGTAGACTTCAGTGGGATTTGGTCATTGAACAGGCTTAGGACTTTGGATCTATCCAACAATGCCTTATCAGGGTCTTTACCTAATGGAATTTCATCCATACATAACTTTAAAGAGATCTTATTACAAGGTAACCAGTTTTCAGGTCCATTATCCACTGATATTGGATTCTGCCTGCATCTGAGTAGGTTGGATTTCAGTGATAATCAGTTGAGTGGAGAACTACCTGAGTCACTAGGGATGCTAAGTTCTTTGAGCTATTTCAAGGCATCAAACAATCATTTCAACAGTGAATTCCCTCAATGGATTGGTAACATGACCAATCTGGAGTACCTAGAGCTCTCAAACAATCAGTTCACTGGAAGCATCCCACAGTCAATAGGGGAACTGAGATCACTGACTCACCTGAGCATTTCAAATAACAAGCTTGTTGGAACTATTCCATCATCATTGAGTTCCTGCACAAAGTTATCTGTGGTCCAGCTCAGAGGTAATGGTTTCAATGGCACCATTCCAGAGGCTTTGTTTGGCCTAGGATTGGAGGACATAGACTTGTCCCATAATGGATTGAGTGGCTCAATTCCACCAGGATCAAGCAGGCTCTTGGAAACTCTCACCAACTTGGATCTTTCAGATAACCATCTCCAAGGGAATATCCCTGCAGAAACTGGTCTTCTTTCAAAACTAAGATATTTGAATCTGTCTTGGAATGATCTTCATTCTCAGATGCCTCCAGAATTCGGCCTCCTTCAGAACCTGACGGTTTTGGATCTTCGCAACAGTGCCTTGCACGGTTCAATTCCAGCAGATATATGTGACTCAGGCAATTTAGCTGTCCTCCAACTTGATGGAAATTCATTTGAAGGGAACATTCCGTCCGAGATTGGAAATTGTAGCTCTCTTTACTTGCTGAGTTCGTCTCACAATAATTTGACAGGTTCAATTCCAAAGTCCATGGCAAAGCTAAACAAGCTCAAAATCCTCAAGCTGGAATTTAATGAGCTTAGTGGAGAGATACCAATGGAGCTTGGAATGCTGCAGAGTCTTCTTGCTGTGAACATATCCTACAACAGGCTCACAGGCAGGCTTCCTACAAGTAGCATATTTCAAAACTTGGACAAAAGTTCATTGGAGGGAAACCTGGGTCTTTGCTCACCCTTGTTGAAGGGTCCATGTAAGATGAATGTCCCCAAACCACTAGTGCTTGACCCAAATGCCTATAACAACCAAATAAGTCCTCAAAGGCAAAGAAACGAATCATCCGAGTCTGACCAGGTCCATCGCCACAGGTTCCTTAGTGTATCTGCTATTGTAGCAATATCTGCATCCTTTGTCATTGTTTTAGGAGTGATTGCTGTTAGCCTACTTAATGTTTCTATAAGGAGAAGGCTAACATTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGCTCCTCAAGATCAGGAAGTCCAGCCACAGGAAAGCTTATCCTGTTCGATTCCCATTCCTCACCTGATTGGATCAGCAATCCTGAGTCCTTGCTCAACAAGGCATCTGAGATTGGAGAAGGAGTCTTTGGAACACTCTACAAGGTTCCATTGGGATCACAAGGTAGAATGGTAGCAATCAAGAAGCTTATATCCTCAAACATAATCCAATATCCAGAAGACTTTGATAGGGAAGTTAGAATCCTAGGGAAAGCAAGGCACCCAAATTTAATTGCATTGAAAGGATACTATTGGACTCCTCAATTACAGCTTTTAGTGACCGAGTTTGCCCCAAATGGTAGCTTGCAAGCCAAGCTACATGAAAGGCTTCCTTCAAGTCCTCCTCTTTCTTGGGCTATAAGGTTCAAAATCTTGCTTGGAACAGCAAAGGGGCTTGCTCATTTGCACCACTCTTTCCGTCCGCCgatcatccactacaacataaagccaaGTAGGAGGCCAGTGGAGTATGGAGAAGACAATGTGCTGATACTGAATGACCATGTGAGGGTGTTGCTTGAGCATGGTAATGTGTTGGAGTGTGTGGATCAAAGCATGAGTGAGTATCCAGAAGATGAGGTGTTGCCTGTTCTGAAGCTAGCAATGGTATGCACCTCTCAAATTCCTTCTAGCAGGCCTACTATGGCTGAAGTGGTGCAAATACTGCAGGTCATTAAAACCCCGGTTCCTCAAAGGATGGAAGTGTTTTGA 2814 0.4236 MSSFQFHLRVLSLLISVSYLLTCLGNNDIPVQLNDDVLGLIVFKSDLDDPSSYLASWNEDDANPCSWQFVQCNPESGRVSEVSLDGLGLSGKIGRGLEKLQHLTVLSLSHNSLSGSISPSLTLSNSLERLNLSHNALSGSIPTSFVNMNSIRFLDLSENSFSGPVPESFFESCSSLHHISLARNIFDGPVPGSLSRCSSLNSINLSNNRFSGNVDFSGIWSLNRLRTLDLSNNALSGSLPNGISSIHNFKEILLQGNQFSGPLSTDIGFCLHLSRLDFSDNQLSGELPESLGMLSSLSYFKASNNHFNSEFPQWIGNMTNLEYLELSNNQFTGSIPQSIGELRSLTHLSISNNKLVGTIPSSLSSCTKLSVVQLRGNGFNGTIPEALFGLGLEDIDLSHNGLSGSIPPGSSRLLETLTNLDLSDNHLQGNIPAETGLLSKLRYLNLSWNDLHSQMPPEFGLLQNLTVLDLRNSALHGSIPADICDSGNLAVLQLDGNSFEGNIPSEIGNCSSLYLLSSSHNNLTGSIPKSMAKLNKLKILKLEFNELSGEIPMELGMLQSLLAVNISYNRLTGRLPTSSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYNNQISPQRQRNESSESDQVHRHRFLSVSAIVAISASFVIVLGVIAVSLLNVSIRRRLTFVDNALESMCSSSSRSGSPATGKLILFDSHSSPDWISNPESLLNKASEIGEGVFGTLYKVPLGSQGRMVAIKKLISSNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEFAPNGSLQAKLHERLPSSPPLSWAIRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSRRPVEYGEDNVLILNDHVRVLLEHGNVLECVDQSMSEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00881 937 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Gma02g00881 937 Pfam Leucine Rich Repeat 224 244 IPR001611 GO:0005515
Gma02g00881 937 Gene3D Ribonuclease Inhibitor 340 610 IPR032675 -
Gma02g00881 937 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 853 935 - -
Gma02g00881 937 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
Gma02g00881 937 Pfam Leucine rich repeat 303 355 IPR001611 GO:0005515
Gma02g00881 937 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Gma02g00881 937 Pfam Leucine Rich repeat 439 451 IPR001611 GO:0005515
Gma02g00881 937 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 852 - -
Gma02g00881 937 SUPERFAMILY L domain-like 311 598 - -
Gma02g00881 937 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Gma02g00881 937 SUPERFAMILY Protein kinase-like (PK-like) 723 931 IPR011009 -
Gma02g00881 937 Gene3D Ribonuclease Inhibitor 198 270 IPR032675 -
Gma02g00881 937 Gene3D Ribonuclease Inhibitor 271 339 IPR032675 -
Gma02g00881 937 Gene3D Transferase(Phosphotransferase) domain 1 707 874 - -
Gma02g00881 937 SUPERFAMILY L domain-like 49 387 - -
Gma02g00881 937 ProSiteProfiles Protein kinase domain profile. 720 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00881 937 PANTHER BNAA09G02190D PROTEIN 10 852 - -
Gma02g00881 937 PRINTS Leucine-rich repeat signature 414 427 - -
Gma02g00881 937 PRINTS Leucine-rich repeat signature 225 238 - -
Gma02g00881 937 PANTHER BNAA09G02190D PROTEIN 853 935 - -
Gma02g00881 937 Pfam Protein kinase domain 722 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00881 937 ProSitePatterns Protein kinases ATP-binding region signature. 726 750 IPR017441 GO:0005524
Gma02g00881 937 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Gma02g00881 937 SMART LRR_typ_2 462 486 IPR003591 -
Gma02g00881 937 SMART LRR_typ_2 342 366 IPR003591 -
Gma02g00881 937 SMART LRR_typ_2 438 461 IPR003591 -
Gma02g00881 937 SMART LRR_typ_2 318 341 IPR003591 -
Gma02g00881 937 SMART LRR_typ_2 100 125 IPR003591 -
Gma02g00881 937 SMART LRR_typ_2 222 246 IPR003591 -
Gma02g00881 937 SMART LRR_typ_2 558 583 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00881 Gma-Chr2 8859790 8862899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00881 853 934 Receptor kinase-like Gene Family AT3G28040 77.108 1.46e-33 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Gma02g00881 Pkinase 5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00881 - - gmx:100795810 1614.74